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The map label for this gene is yidK [H]

Identifier: 170680795

GI number: 170680795

Start: 4134658

End: 4136373

Strand: Reverse

Name: yidK [H]

Synonym: EcSMS35_4044

Alternate gene names: 170680795

Gene position: 4136373-4134658 (Counterclockwise)

Preceding gene: 170680175

Following gene: 170681583

Centisome position: 81.61

GC content: 53.15

Gene sequence:

>1716_bases
ATGAATTCGTTACAAATCTTGAGTTTTGTCGGTTTTACGCTGCTGGTGGCGATCATCACCTGGTGGAAGGTTCGCAAAAC
AGATACCGGATCGCAACAAGGCTATTTTCTTGCCGGACGTTCACTAAAAGCGCCGGTTATTGCCGCTTCGTTAATGCTAA
CCAACCTTTCCACGGAACAACTGGTTGGACTTTCCGGGCAGGCCTACAAAAGCGGCATGTCGGTGATGGGCTGGGAAGTC
ACTTCTGCGGTGACGCTGATCTTCCTCGCGCTAATCTTTTTACCGCGCTATCTGAAGCGTGGCATTGCCACCATCCCCGA
TTTCCTGGAGGAACGTTATGATAAAACGACGCGTATTATCATCGACTTCTGCTTCCTCATTGCCACCGGTGTCTGCTTTC
TGCCGATTGTTCTCTACTCCGGCGCGTTGGCGCTCAACAGCCTGTTTCACGTCGGGGAATCGTTACAAATTTCCCACGGT
GCGGCTATCTGGCTATTGGTAATTTTGCTTGGTCTGGCGGGAATTTTGTATGCGGTGATCGGCGGACTGCGCGCAATGGC
AGTGGCGGACTCCATCAACGGTATTGGGCTGGTTATTGGCGGGTTGATGGTGCCGATATTTGGCCTGATCGCGATGGGCA
AGGGCAGCTTTATGCAGGGCATTGAGCAACTCACCACCGTTCACGCCGAGAAATTAAACTCAGTCGGTGGCCCGACCGAT
CCCTTGCCGATTGGCGCGGCATTTACCGGTTTGATTCTGGTGAACACCTTTTACTGGTGTACAAATCAGGGCATCGTGCA
ACGCACGCTGGCGTCAAAAAGCCTGGCGGAAGGGCAAAAGGGGGCGCTGTTAACGGCGGTGCTGAAAATGCTCGACCCGC
TGGTACTGGTGCTGCCAGGGTTGATTGCGTTTCATCTGTATCAGGATTTACCTAAAGCCGACATGGCCTACCCGACGCTG
GTCAATAACGTTCTGCCAGTGCCACTGGTGGGTTTCTTCGGCGCGGTGTTATTTGGTGCGGTGATCAGTACCTTCAACGG
CTTTCTGAATAGCGCCAGTACGTTATTCAGTATGGGTATTTACCGGCGCATCATTAACCAGAATGCCGAGCCGCAGCAGC
TGGTCACCGTTGGGCGCAAATTTGGTTTCTTTATCGCCATCGTTTCGGTGCTGGTCGCGCCGTGGATCGCCAACGCGCCG
CAGGGGCTGTATAGCTGGATGAAACAGCTCAACGGTATTTACAACGTGCCGCTGGTTACCATCATCATTATGGGCTTTTT
CTTCCCGCGCATCCCGGCGCTGGCGGCAAAAGTGGCGATGGGGATTGGCATAATCAGCTACATCACCATCAACTATCTGG
TGAAGTTCGACTTCCATTTCCTCTATGTGCTGGCCTGTACGTTCTGCATCAACGTGGTCGTGATGCTGGTGATCGGTTTT
ATCAAACCGCGCGCCACGCCGTTCACCTTCAAAGATGCGTTTGCGGTGGACATGAAACCGTGGAAAAACGTCAAGATCGC
GTCAATTGGCATCCTGTTCGCTATGATTGGCGTCTATGCCGGGCTGGCTGAATTCGGCGGCTACGGTACGCGCTGGTTAG
CGATGATCAGTTATTTCATCGCTGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGCGGCATCGTCACGACCCAGCC
GTAACCTTTACTCCCGACGCGAAGGATAGCCTATGA

Upstream 100 bases:

>100_bases
ACGACGTTTGTATTTTAAGAATCTGACTGCCTGACCCGACGCATTTTACCTCTCCCTATATTCATGCGTCCGGGACATAA
ACATAAATAAGGGCTATGAG

Downstream 100 bases:

>100_bases
AACGCCCCAATTTTCTGTTCATCATGACCGATACCCAGGCCACCAATATGGTCGGTTGCTATAGCGGTAAGCCGCTGAAT
ACGCAAAATATTGATAGTCT

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MNSLQILSFVGFTLLVAIITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPIFGLIAMGKGSFMQGIEQLTTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL

Sequences:

>Translated_571_residues
MNSLQILSFVGFTLLVAIITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPIFGLIAMGKGSFMQGIEQLTTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL
>Mature_571_residues
MNSLQILSFVGFTLLVAIITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPIFGLIAMGKGSFMQGIEQLTTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI110835708, Length=461, Percent_Identity=29.0672451193059, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI17941285, Length=456, Percent_Identity=29.8245614035088, Blast_Score=174, Evalue=3e-43,
Organism=Homo sapiens, GI14140236, Length=489, Percent_Identity=26.3803680981595, Blast_Score=169, Evalue=9e-42,
Organism=Homo sapiens, GI4507031, Length=468, Percent_Identity=27.3504273504274, Blast_Score=168, Evalue=2e-41,
Organism=Homo sapiens, GI4507033, Length=473, Percent_Identity=30.2325581395349, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI206597483, Length=505, Percent_Identity=27.5247524752475, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI109659836, Length=454, Percent_Identity=29.5154185022026, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI206597487, Length=530, Percent_Identity=26.9811320754717, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI109659839, Length=470, Percent_Identity=28.2978723404255, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI256985183, Length=435, Percent_Identity=25.5172413793103, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI157671931, Length=451, Percent_Identity=23.059866962306, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4507035, Length=427, Percent_Identity=22.4824355971897, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI167466278, Length=340, Percent_Identity=24.7058823529412, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI310128183, Length=394, Percent_Identity=25.1269035532995, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1790113, Length=571, Percent_Identity=99.1243432574431, Blast_Score=1140, Evalue=0.0,
Organism=Escherichia coli, GI87082237, Length=472, Percent_Identity=23.3050847457627, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533094, Length=433, Percent_Identity=20.3233256351039, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221459584, Length=335, Percent_Identity=28.6567164179104, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24645928, Length=519, Percent_Identity=23.6994219653179, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19920916, Length=359, Percent_Identity=24.5125348189415, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI221459586, Length=415, Percent_Identity=23.1325301204819, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161076631, Length=347, Percent_Identity=23.6311239193084, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573698, Length=342, Percent_Identity=24.2690058479532, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24651739, Length=439, Percent_Identity=20.9567198177677, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221459588, Length=413, Percent_Identity=22.2760290556901, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24641117, Length=322, Percent_Identity=22.0496894409938, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 62096; Mature: 62096

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]