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The map label for this gene is yhjA [H]

Identifier: 170680372

GI number: 170680372

Start: 3888427

End: 3889824

Strand: Reverse

Name: yhjA [H]

Synonym: EcSMS35_3821

Alternate gene names: 170680372

Gene position: 3889824-3888427 (Counterclockwise)

Preceding gene: 170682867

Following gene: 170679884

Centisome position: 76.75

GC content: 48.35

Gene sequence:

>1398_bases
ATGAAAATGGTCTCACGTATTACCGCGATCGGCCTGGCTGGCGTCGCGATTTGCTATTTAGGGTTATCTGGTTATGTGTG
GTACCACGATAATAAACGCAGTAAGCAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATCAGGTTTTAGGTTTTC
TTCGCGAAAAAGGATGCGACTATTGCCATACGCCTTCGGCAGAATTACCCGCCTATTATTATATTCCTGGCGCGAAACAG
TTGATGGATTACGACATTAAGCTTGGATATAAATCTTTTAACCTCGAGGCCGTGCGTGCGGCTCTGCTGGCTGATAAACC
CGTTTCGCAAAGCGATCTGAATAAGATTGAATGGGTAATGCAGTATGAAACCATGCCACCAACGCGTTATACCGCGCTAC
ACTGGGCGGGTAAGGTGAGTGATGAAGAGCGGGCGGAAATACTCGCCTGGATTGCAAAACAACGCGCAGAATATTACGCC
AGTAATGATACTGCTCCGGAGCATCGCAATGAACCGGTGCAGCCCATCCCGCAAAAACTGCCTACCGATGCGCAAAAAGT
GGCGTTGGGCTTTGCGCTGTATCACGATCCCCGTTTATCGGCTGATAGCACCATTTCATGCGCTCATTGCCATGCGTTGA
ATGCGGGGGGCGTCGATGGCAGAAAAACATCGATTGGTGTTGGTGGCGCAGTTGGGCCGATTAACGCGCCGACGGTATTT
AACTCAGTATTTAACGTTGAGCAGTTCTGGGATGGTCGTGCGGCAACATTGCAGGATCAGGCGGGTGGACCGCCGTTGAA
CCCGATTGAAATGGCGTCGAAATCCTGGGACGAAATTATTGCTAAGCTGGAAAAAGATCCGCAGCTTAAAGCGCAGTTCC
TCGAAGTCTATCCGCAAGGTTTCAGCGGTGAAAATATTACTGATGCCATTGCTGAATTTGAAAAAACATTAATTACGCCG
GATTCCCCATTTGATAAATGGTTGCGTGGAGATGAGAATGCGCTGACGGCACAACAGAAAAAAGGCTATCAATTATTTAA
AGATAATAAATGTGCAACTTGTCATGGTGGTATTATTCTCGGCGGACGTTCCTTCGAACCGTTGGGGCTGAAAAAAGACT
TTAACTTTGGTGAAATTACGGCGGCGGATATTGGTCGTATGAATGTGACTAAAGAAGAGCGCGATAAATTGCGTCAGAAA
GTACCCGGTTTACGTAACGTTGCACTAACGGCACCGTACTTCCATCGCGGTGATGTGCCGACGCTGGACGGGGCGGTGAA
ACTGATGTTGCGCTATCAGGTAGGCAAAGAGCTGCCGCAGGAGGATGTGGATGATATCGTAGCTTTCCTGCACAGTCTGA
ACGGGGTTTACACGCCGTATATGCAGGATAAACAATAA

Upstream 100 bases:

>100_bases
ATTTCCCTGTTTTTTATGATGGCTTTGTCTCGCAGAGACGTTTGCAGCATTCTGGAAAATTTTCTGGGTCACAATAACTC
ACCACCGTGAGGGAAGAATA

Downstream 100 bases:

>100_bases
TTAATTTAATCGCCCGAACAGGAATGTTTGGGCGATTTTTATTACGATAATAAAGTCTGTTTTTAATATTATCATGTTAA
ATGTTTATATTATAAAAAGT

Product: di-heme cytochrome c peroxidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNQVLGFLREKGCDYCHTPSAELPAYYYIPGAKQ
LMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITP
DSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQK
VPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ

Sequences:

>Translated_465_residues
MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNQVLGFLREKGCDYCHTPSAELPAYYYIPGAKQ
LMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITP
DSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQK
VPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ
>Mature_465_residues
MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNQVLGFLREKGCDYCHTPSAELPAYYYIPGAKQ
LMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITP
DSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQK
VPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=465, Percent_Identity=99.5698924731183, Blast_Score=968, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 51541; Mature: 51541

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNQVLGFLREKGCD
CCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHCCCC
YCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVM
CCCCCCCCCCEEEECCCHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHEEEE
QYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKL
EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
PTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
CCCHHHHHHHHHEEECCCCCCCCCEEEHHHEECCCCCCCCCCEEECCCCCCCCCCCHHHH
NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQG
HHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCC
FSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIIL
CCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCEEECCCCCEEECCCEEE
GGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVP
CCCCCCCCCCCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
TLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNQVLGFLREKGCD
CCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHCCCC
YCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVM
CCCCCCCCCCEEEECCCHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHEEEE
QYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKL
EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
PTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
CCCHHHHHHHHHEEECCCCCCCCCEEEHHHEECCCCCCCCCCEEECCCCCCCCCCCHHHH
NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQG
HHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCC
FSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIIL
CCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCEEECCCCCEEECCCEEE
GGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVP
CCCCCCCCCCCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
TLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]