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The map label for this gene is kaiB [H]

Identifier: 170077542

GI number: 170077542

Start: 951934

End: 952272

Strand: Reverse

Name: kaiB [H]

Synonym: SYNPCC7002_A0920

Alternate gene names: 170077542

Gene position: 952272-951934 (Counterclockwise)

Preceding gene: 170077543

Following gene: 170077541

Centisome position: 31.66

GC content: 48.38

Gene sequence:

>339_bases
ATGGCTTCTGACTTCTCTAAGGATCCCTCCCCGCGGCTAGATCCAAGCCCTCCCATCCACCACAAACAAAATGAATTCTA
TGTGCTTTATCTCTACGTTGCTGGCAGTAATAGCCATTCCCGCTGGGCGATCAACGAACTAGAAAGCATTTGCAGCGAAT
ATCTGCCCGGACGCCACGAAATCCGGATCATTGATATTTATGAGCACCCCGACCTCGCTGAGTCAGAACGGATTGTTGCG
ACCCCGACTCTGATCAAAAAATTGCCGCCCCCCTTGCGAAAGTTTATCGGCGACTTATCCGATCGAGAAAGTATTCTGAT
TGGTTTAGATATTTGGTAA

Upstream 100 bases:

>100_bases
CACAAACTCAAATGGAAGATATAGAATGGACGGCGATCGCCCTCGAACAAATTTTGCAGCGACAACCTACCGTGCTTCTG
GCATAACCTGACCCAAATAC

Downstream 100 bases:

>100_bases
AAGCCATGGGGAGAGACCGCCCAACCGCTATACTGACAGACGTTCTGTTTTAATGTGGGCTGTTATGGCAGGGGAAAATC
CTGAGGCAAAACTTTCGCGT

Product: circadian clock protein KaiB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MASDFSKDPSPRLDPSPPIHHKQNEFYVLYLYVAGSNSHSRWAINELESICSEYLPGRHEIRIIDIYEHPDLAESERIVA
TPTLIKKLPPPLRKFIGDLSDRESILIGLDIW

Sequences:

>Translated_112_residues
MASDFSKDPSPRLDPSPPIHHKQNEFYVLYLYVAGSNSHSRWAINELESICSEYLPGRHEIRIIDIYEHPDLAESERIVA
TPTLIKKLPPPLRKFIGDLSDRESILIGLDIW
>Mature_111_residues
ASDFSKDPSPRLDPSPPIHHKQNEFYVLYLYVAGSNSHSRWAINELESICSEYLPGRHEIRIIDIYEHPDLAESERIVAT
PTLIKKLPPPLRKFIGDLSDRESILIGLDIW

Specific function: Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kaiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013474
- InterPro:   IPR011649
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF07689 KaiB [H]

EC number: NA

Molecular weight: Translated: 12881; Mature: 12750

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDFSKDPSPRLDPSPPIHHKQNEFYVLYLYVAGSNSHSRWAINELESICSEYLPGRHE
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCE
IRIIDIYEHPDLAESERIVATPTLIKKLPPPLRKFIGDLSDRESILIGLDIW
EEEEEEECCCCCCCCCEEEECHHHHHHCCHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure 
ASDFSKDPSPRLDPSPPIHHKQNEFYVLYLYVAGSNSHSRWAINELESICSEYLPGRHE
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCE
IRIIDIYEHPDLAESERIVATPTLIKKLPPPLRKFIGDLSDRESILIGLDIW
EEEEEEECCCCCCCCCEEEECHHHHHHCCHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA