| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yeeZ [H]
Identifier: 170077539
GI number: 170077539
Start: 949252
End: 950079
Strand: Reverse
Name: yeeZ [H]
Synonym: SYNPCC7002_A0917
Alternate gene names: 170077539
Gene position: 950079-949252 (Counterclockwise)
Preceding gene: 170077541
Following gene: 170077538
Centisome position: 31.58
GC content: 50.6
Gene sequence:
>828_bases GTGAAAATTGCAATTATTGGCTGTGGCTATGTGGGCCAGGCGATCGCCAAGCAGTGGACAACGGCGGGTCATCAAGTGAC CGTGACAACAACGACCCCCGAAAAAGTCTCCCAGTTACAAGGGATTGCTCACCAGGTGAAAGTCCTCAGCGGCGATCAAC CAGAAGCCCTCCAGGAGCTTTGTGAAGGCCAAGATGTCATTCTTTTGGCAGTAGGTTCCAAGGGGCGCACCGAAGCAAAT TATCGGCAGGCTTATCTGAAAACGGCCCAAAACCTCGCCCAGGCCCTCACCCATAACGACACCGTTAAACAGGTGATTTA TACCAGCAGCTACGCCATCGTCGGCAATCACCACGGTGCTTGGGTTGATGAAAAGACCCCCGACAAACCACCCCATGTTT TTGCAGAAATTCTTTTGGCAACGGAACAAACCCTAAAGGCGATCGCCACCGATGCACGTCAGGTTTGCATTTTGCGTTTG GGGGGAATCTATGGTGAAGGCCGAGAAATTAAGAAAATTTTCCAGCGGGCCATGGGGCAGGTGCGACCTGGTGACGGCAG CGAATATGGTAACTGGATTCATTTAGCAGACATTGTGGCAGCGATCGAGTTTGCCCAGATCCATAATCTGAACGGTTTAT TCAATCTAGTTTGTGATGAACCCCTGCCCCGGCGGGAATTGCTCTCTCGTTTGGCCGAAAAATATGCCCTGGCCCCAGTA CGTTGGGATGCGAGCCAACCCTCTGATCGCCCTTTAAATGTGCGTGTATCTAACCAAAAATTAAAAAATTTAGGGTTTAC ATTCCGCCATCCGACCATTGAAGTTTAG
Upstream 100 bases:
>100_bases CCAGGGGCGGAAATGGCGGAAAAAGGGGCATAATAGCGACAAAACAGGACTTTACAATGCTTAAAATTATGGCATGGTTT GTTAAGGAGGAATTCCCTTG
Downstream 100 bases:
>100_bases ATTGAAAGACAGAGCATTACGACCCAAGGTAGAGTTGACCCGAAAAATATGCCCATTGACTTCATTCGGGGGGCCAGTTA CCCATTCCGCGCCGCGAGAT
Product: NAD dependent epimerase/dehydratase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKIAIIGCGYVGQAIAKQWTTAGHQVTVTTTTPEKVSQLQGIAHQVKVLSGDQPEALQELCEGQDVILLAVGSKGRTEAN YRQAYLKTAQNLAQALTHNDTVKQVIYTSSYAIVGNHHGAWVDEKTPDKPPHVFAEILLATEQTLKAIATDARQVCILRL GGIYGEGREIKKIFQRAMGQVRPGDGSEYGNWIHLADIVAAIEFAQIHNLNGLFNLVCDEPLPRRELLSRLAEKYALAPV RWDASQPSDRPLNVRVSNQKLKNLGFTFRHPTIEV
Sequences:
>Translated_275_residues MKIAIIGCGYVGQAIAKQWTTAGHQVTVTTTTPEKVSQLQGIAHQVKVLSGDQPEALQELCEGQDVILLAVGSKGRTEAN YRQAYLKTAQNLAQALTHNDTVKQVIYTSSYAIVGNHHGAWVDEKTPDKPPHVFAEILLATEQTLKAIATDARQVCILRL GGIYGEGREIKKIFQRAMGQVRPGDGSEYGNWIHLADIVAAIEFAQIHNLNGLFNLVCDEPLPRRELLSRLAEKYALAPV RWDASQPSDRPLNVRVSNQKLKNLGFTFRHPTIEV >Mature_275_residues MKIAIIGCGYVGQAIAKQWTTAGHQVTVTTTTPEKVSQLQGIAHQVKVLSGDQPEALQELCEGQDVILLAVGSKGRTEAN YRQAYLKTAQNLAQALTHNDTVKQVIYTSSYAIVGNHHGAWVDEKTPDKPPHVFAEILLATEQTLKAIATDARQVCILRL GGIYGEGREIKKIFQRAMGQVRPGDGSEYGNWIHLADIVAAIEFAQIHNLNGLFNLVCDEPLPRRELLSRLAEKYALAPV RWDASQPSDRPLNVRVSNQKLKNLGFTFRHPTIEV
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=281, Percent_Identity=27.7580071174377, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 30338; Mature: 30338
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIIGCGYVGQAIAKQWTTAGHQVTVTTTTPEKVSQLQGIAHQVKVLSGDQPEALQEL CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHH CEGQDVILLAVGSKGRTEANYRQAYLKTAQNLAQALTHNDTVKQVIYTSSYAIVGNHHGA HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCC WVDEKTPDKPPHVFAEILLATEQTLKAIATDARQVCILRLGGIYGEGREIKKIFQRAMGQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC VRPGDGSEYGNWIHLADIVAAIEFAQIHNLNGLFNLVCDEPLPRRELLSRLAEKYALAPV CCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHEECCCCCCHHHHHHHHHHHHCCCCE RWDASQPSDRPLNVRVSNQKLKNLGFTFRHPTIEV EECCCCCCCCCEEEEECCHHHHHCCCEECCCCCCC >Mature Secondary Structure MKIAIIGCGYVGQAIAKQWTTAGHQVTVTTTTPEKVSQLQGIAHQVKVLSGDQPEALQEL CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHH CEGQDVILLAVGSKGRTEANYRQAYLKTAQNLAQALTHNDTVKQVIYTSSYAIVGNHHGA HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCC WVDEKTPDKPPHVFAEILLATEQTLKAIATDARQVCILRLGGIYGEGREIKKIFQRAMGQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC VRPGDGSEYGNWIHLADIVAAIEFAQIHNLNGLFNLVCDEPLPRRELLSRLAEKYALAPV CCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHEECCCCCCHHHHHHHHHHHHCCCCE RWDASQPSDRPLNVRVSNQKLKNLGFTFRHPTIEV EECCCCCCCCCEEEEECCHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]