| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is cysZ [H]
Identifier: 170077538
GI number: 170077538
Start: 948397
End: 949203
Strand: Reverse
Name: cysZ [H]
Synonym: SYNPCC7002_A0916
Alternate gene names: 170077538
Gene position: 949203-948397 (Counterclockwise)
Preceding gene: 170077539
Following gene: 170077537
Centisome position: 31.56
GC content: 51.55
Gene sequence:
>807_bases ATGCCCATTGACTTCATTCGGGGGGCCAGTTACCCATTCCGCGCCGCGAGATTTTTTTCCCGTCACCCGAAGCTTCTCCA ATATTTAGCGATTCCCCTTGGCGTTAATGTCGTGCTGGGGGGATTGCTCTATACTTTTTCTTTGCGCTGGGCGTGGCGGA CGGCGGGGGCTGGCTACACTTGGATTAGCACCAGTCTGATTGGTTTAATTGATCGCTTACCTCCTTGGTTGCAGTGGTTA GATTACGGCGCAAATTTTCTGGGAGGGTTGTTAGGCCTGATTTTCATTGCGGCAGTGTTTATTGCTGTGGGACTGCTGCT GGTGCAGTTTGGCGTTATTCTGGGTGCCCCTTGGTATGGCCAACTCTCAGAACAGATTGAAAAACTCCGCACCAGTCGCC TGGAAATCATTGAAGTGGGTATTTTCCGCGACATTGGCCGCGCCATTCTCTTTGAACTAAAAAAATTAGCCTTGGTTTTG GCGATCGCCCCCTTGTTGTTTGGGATCAACTTTTTGCCGGGGATTGGTAGCGTGCTGTCCTCCCTGGGAGGCTTGGCGGT GACTTTAACGATTATTTGCCTTGATTTTTTCGATGCCACCCTTGAGAGAAGGCGCTTTACATTTCGTCAAAAGTTGCGGC AAGTTTACCGGGCCTTGCCGGGGAGTGCGGGGTTTGGGCTGGTTTGTCTAGGGTTGATCAGTTTGCCTTTTCTCAATCTC GTGACGATTCCCCTCTGCGTTGCCTCTGGCACTTTGTTTGTGTGCGATCGCCTGTTGCCAAAGCTGAATCCCCCAGCCAG TGACTAG
Upstream 100 bases:
>100_bases AAAATTAAAAAATTTAGGGTTTACATTCCGCCATCCGACCATTGAAGTTTAGATTGAAAGACAGAGCATTACGACCCAAG GTAGAGTTGACCCGAAAAAT
Downstream 100 bases:
>100_bases GAACCGAGGACAGGACACTCTCTTAAACTCTTCCCAATGCAGGAAAACCGATTGTTTATCAATCACGCCACGGAACATTA ATCCTCTTAATTGTCAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPIDFIRGASYPFRAARFFSRHPKLLQYLAIPLGVNVVLGGLLYTFSLRWAWRTAGAGYTWISTSLIGLIDRLPPWLQWL DYGANFLGGLLGLIFIAAVFIAVGLLLVQFGVILGAPWYGQLSEQIEKLRTSRLEIIEVGIFRDIGRAILFELKKLALVL AIAPLLFGINFLPGIGSVLSSLGGLAVTLTIICLDFFDATLERRRFTFRQKLRQVYRALPGSAGFGLVCLGLISLPFLNL VTIPLCVASGTLFVCDRLLPKLNPPASD
Sequences:
>Translated_268_residues MPIDFIRGASYPFRAARFFSRHPKLLQYLAIPLGVNVVLGGLLYTFSLRWAWRTAGAGYTWISTSLIGLIDRLPPWLQWL DYGANFLGGLLGLIFIAAVFIAVGLLLVQFGVILGAPWYGQLSEQIEKLRTSRLEIIEVGIFRDIGRAILFELKKLALVL AIAPLLFGINFLPGIGSVLSSLGGLAVTLTIICLDFFDATLERRRFTFRQKLRQVYRALPGSAGFGLVCLGLISLPFLNL VTIPLCVASGTLFVCDRLLPKLNPPASD >Mature_267_residues PIDFIRGASYPFRAARFFSRHPKLLQYLAIPLGVNVVLGGLLYTFSLRWAWRTAGAGYTWISTSLIGLIDRLPPWLQWLD YGANFLGGLLGLIFIAAVFIAVGLLLVQFGVILGAPWYGQLSEQIEKLRTSRLEIIEVGIFRDIGRAILFELKKLALVLA IAPLLFGINFLPGIGSVLSSLGGLAVTLTIICLDFFDATLERRRFTFRQKLRQVYRALPGSAGFGLVCLGLISLPFLNLV TIPLCVASGTLFVCDRLLPKLNPPASD
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=253, Percent_Identity=24.5059288537549, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 29498; Mature: 29366
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDFIRGASYPFRAARFFSRHPKLLQYLAIPLGVNVVLGGLLYTFSLRWAWRTAGAGYT CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WISTSLIGLIDRLPPWLQWLDYGANFLGGLLGLIFIAAVFIAVGLLLVQFGVILGAPWYG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QLSEQIEKLRTSRLEIIEVGIFRDIGRAILFELKKLALVLAIAPLLFGINFLPGIGSVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLGGLAVTLTIICLDFFDATLERRRFTFRQKLRQVYRALPGSAGFGLVCLGLISLPFLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VTIPLCVASGTLFVCDRLLPKLNPPASD HHHHHHHHCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PIDFIRGASYPFRAARFFSRHPKLLQYLAIPLGVNVVLGGLLYTFSLRWAWRTAGAGYT CCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WISTSLIGLIDRLPPWLQWLDYGANFLGGLLGLIFIAAVFIAVGLLLVQFGVILGAPWYG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QLSEQIEKLRTSRLEIIEVGIFRDIGRAILFELKKLALVLAIAPLLFGINFLPGIGSVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLGGLAVTLTIICLDFFDATLERRRFTFRQKLRQVYRALPGSAGFGLVCLGLISLPFLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VTIPLCVASGTLFVCDRLLPKLNPPASD HHHHHHHHCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA