| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077514
Identifier: 170077514
GI number: 170077514
Start: 923329
End: 923955
Strand: Reverse
Name: 170077514
Synonym: SYNPCC7002_A0892
Alternate gene names: NA
Gene position: 923955-923329 (Counterclockwise)
Preceding gene: 170077515
Following gene: 170077513
Centisome position: 30.72
GC content: 52.31
Gene sequence:
>627_bases ATGTCCCCAACGACCCACACCACGGGCCAAGATCCTGAAGTCCAGCTCCAACGGGTTTGTACCCAAGCCTATGGGGAGCC TCTGCAACTACTTTGGTGGGAAATTGCGGATGCCCAGGGGAGCCTCAAGGTCATTTGTCGAGAACAGCGCCGGGGGTATT ACATTGAGGCGTTACTGCACCGTACCGCCGCTGGCTATCAACCGAGTCATGGTTTGGTGGCAGCCTTTGCGACCTTGTTA AAACCTGACCCCAGTCGCTGGGAAAATTTGACCAAACGGGCCACGGCAACGGACTGGCAAGCCCTCGATCGCCTCTGGTT TTATGCTTTGACGATTCCCGATAGTGAGATTCTCTGGGGCGATGAAACGATTATTGGTGTTACGGTGGCCGAAAAGGCGA TCGCCCGGTTTGGCTATGCCGTGCCCGACCCATCCTTGCTTCCGGTCTTGATCTTTGAAAATCGAGCTTTGGGGTTAAAT CTAATCAGCTATGTTTGCGATCCAGATCATTTTGCGGGCGAGAATCTCCTTTATGATCACCGTACCCACCGGGGAGAAGC TTACCCAAATCTGTTTGAAGCTCAAATCCGCCTAAAACAAAAACTAGATTTGTATTTTCCCGGCTAG
Upstream 100 bases:
>100_bases AGTTCGGTCACCCCAACGGTTCAACTCTGGGGTGACTTTTCTCTTTTATCGGCCTAGGGGTTAAGCTGGATTTTGCTCTG TCACCACCCAATTTTTGTCC
Downstream 100 bases:
>100_bases ACCGCCGCGATCCATGGCTTGTCCTGGGGGCGAATGGCTCAGAATTTATTGGGTGCAAATAACCCTAAATAATCCGTTGA GATCCCAGATAAAACTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSPTTHTTGQDPEVQLQRVCTQAYGEPLQLLWWEIADAQGSLKVICREQRRGYYIEALLHRTAAGYQPSHGLVAAFATLL KPDPSRWENLTKRATATDWQALDRLWFYALTIPDSEILWGDETIIGVTVAEKAIARFGYAVPDPSLLPVLIFENRALGLN LISYVCDPDHFAGENLLYDHRTHRGEAYPNLFEAQIRLKQKLDLYFPG
Sequences:
>Translated_208_residues MSPTTHTTGQDPEVQLQRVCTQAYGEPLQLLWWEIADAQGSLKVICREQRRGYYIEALLHRTAAGYQPSHGLVAAFATLL KPDPSRWENLTKRATATDWQALDRLWFYALTIPDSEILWGDETIIGVTVAEKAIARFGYAVPDPSLLPVLIFENRALGLN LISYVCDPDHFAGENLLYDHRTHRGEAYPNLFEAQIRLKQKLDLYFPG >Mature_207_residues SPTTHTTGQDPEVQLQRVCTQAYGEPLQLLWWEIADAQGSLKVICREQRRGYYIEALLHRTAAGYQPSHGLVAAFATLLK PDPSRWENLTKRATATDWQALDRLWFYALTIPDSEILWGDETIIGVTVAEKAIARFGYAVPDPSLLPVLIFENRALGLNL ISYVCDPDHFAGENLLYDHRTHRGEAYPNLFEAQIRLKQKLDLYFPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23614; Mature: 23483
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTTHTTGQDPEVQLQRVCTQAYGEPLQLLWWEIADAQGSLKVICREQRRGYYIEALLH CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHEEHHHHCCCHHHHHHH RTAAGYQPSHGLVAAFATLLKPDPSRWENLTKRATATDWQALDRLWFYALTIPDSEILWG HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEC DETIIGVTVAEKAIARFGYAVPDPSLLPVLIFENRALGLNLISYVCDPDHFAGENLLYDH CCEEEEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEECC RTHRGEAYPNLFEAQIRLKQKLDLYFPG CCCCCCCCCHHHHHHHHHHHHCEEECCC >Mature Secondary Structure SPTTHTTGQDPEVQLQRVCTQAYGEPLQLLWWEIADAQGSLKVICREQRRGYYIEALLH CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHEEHHHHCCCHHHHHHH RTAAGYQPSHGLVAAFATLLKPDPSRWENLTKRATATDWQALDRLWFYALTIPDSEILWG HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEC DETIIGVTVAEKAIARFGYAVPDPSLLPVLIFENRALGLNLISYVCDPDHFAGENLLYDH CCEEEEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEECC RTHRGEAYPNLFEAQIRLKQKLDLYFPG CCCCCCCCCHHHHHHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA