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The map label for this gene is sucC [H]

Identifier: 170077513

GI number: 170077513

Start: 921877

End: 923043

Strand: Reverse

Name: sucC [H]

Synonym: SYNPCC7002_A0891

Alternate gene names: 170077513

Gene position: 923043-921877 (Counterclockwise)

Preceding gene: 170077514

Following gene: 170077512

Centisome position: 30.69

GC content: 53.64

Gene sequence:

>1167_bases
ATGGAATTGCTCGAATACCAAGCAAAACAACTTTTTGAACAGGTGGGGATACCCACGTTGCCGTCCCAGATTATTGCGGA
TCCCCGGGAACTGAAACAGTTGCAAATTCCCTATCCCATTGTGCTGAAGTCCCAGGTGCGGGCTGGGGGACGGGGTAAAG
CTGGGGGCATTAAACGGGTGCAGAATACCATCGATGCGATCGCCGCCGCGCGGAATATTTTTAATTTGGCGATCGCCGGG
CAATACCCTGATGTTTTACTGGCCGAGGCCCACTACGAACGCAAGCAGGAAATTTTCTTGGCGGTGGTTTTAGACTACGA
ATTGCAGCGGCCTGTGCTTTTGGGGTCAGCCCACGGCGGCATGGAAATCGATCAGCTTTTGGCGAACCTCCATCAAGTGG
TGATCAAAGACTTTTTCTCCCCGTTCCAAGCGCGCCATCTCCTCAACAAAATGGGCATCCGGGGCGCATTGGTGCCCGCC
TTGAGCGACATCATCAAAAAAATGTACGATCTGCTCCTTGCCAAGGACTTGGAATTGGTGGAAATCAATCCCCTGGGCAT
TAACCAAGCAGGGGAATTAATGGCCCTTGATGGTAAGGTCACGGTTCACGATACGGCCCTCCGTAAGCACCCTGAAATCG
CCCTATTTTACGAGCACCAAAACCAACTCAGCTTTACCCCAGAGGCGGCCCCCCTCTCTTGGCAACATGATGTCCAGGGG
GGCGCGGTGGGCATTGTTTGTTATGGGGTGGGGGCAGCGGCGGTGATTTGGGATATGCTCCATGATCTCAAGGGTCATCC
AGCCTGCTGTTGGCTCCTTGGCCCCCGCGCCCAGGGTCGAGTGTTTTCACCCTACGACCTAGATGAACAGATCGAAATTA
TTCTTGAACAATTGGCCGCACTACCGCAGATCAAGGTGGTTTTGTTGAACTTGGTGGCGGAAGCAGAAATTAACCAACGC
ATTTTGGCAACTTTAACCGCACGTTTACCCCAATTGGCGATCGCCCCGGATGCTGACCCCGATCCAGAGCTACCTGAGTT
GCCCCAACACATTATCGTGCGCTGTTTACCTTCCCTTGACCCGGTGATCGCGCCTGGTTGCCATTGGGAAGAAGATTTAG
AGGCCGCCGTCAAACAGGCGATCGCCCTCAGTAAACCCGGAACCTAA

Upstream 100 bases:

>100_bases
AATCGTTGCGCCTCGGCACTGGAACCTCTGGCCTTGATGACTAGGGTTCAGGTTTTAAGTTAGGCTTGAGTTGAGAAATA
TAGAGGTTGCCTCTGCGCTA

Downstream 100 bases:

>100_bases
AACGCCTTTCAACTTTTCTCACACACAGGACTTAGACACAACGGCAATGGCTTGGCACACAAATCACAATATTTTGATTC
AAGGGATCCATACGCCCCTC

Product: succinate-CoA ligase beta chain

Products: NA

Alternate protein names: Succinyl-CoA synthetase subunit beta-1; SCS-beta-1 [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MELLEYQAKQLFEQVGIPTLPSQIIADPRELKQLQIPYPIVLKSQVRAGGRGKAGGIKRVQNTIDAIAAARNIFNLAIAG
QYPDVLLAEAHYERKQEIFLAVVLDYELQRPVLLGSAHGGMEIDQLLANLHQVVIKDFFSPFQARHLLNKMGIRGALVPA
LSDIIKKMYDLLLAKDLELVEINPLGINQAGELMALDGKVTVHDTALRKHPEIALFYEHQNQLSFTPEAAPLSWQHDVQG
GAVGIVCYGVGAAAVIWDMLHDLKGHPACCWLLGPRAQGRVFSPYDLDEQIEIILEQLAALPQIKVVLLNLVAEAEINQR
ILATLTARLPQLAIAPDADPDPELPELPQHIIVRCLPSLDPVIAPGCHWEEDLEAAVKQAIALSKPGT

Sequences:

>Translated_388_residues
MELLEYQAKQLFEQVGIPTLPSQIIADPRELKQLQIPYPIVLKSQVRAGGRGKAGGIKRVQNTIDAIAAARNIFNLAIAG
QYPDVLLAEAHYERKQEIFLAVVLDYELQRPVLLGSAHGGMEIDQLLANLHQVVIKDFFSPFQARHLLNKMGIRGALVPA
LSDIIKKMYDLLLAKDLELVEINPLGINQAGELMALDGKVTVHDTALRKHPEIALFYEHQNQLSFTPEAAPLSWQHDVQG
GAVGIVCYGVGAAAVIWDMLHDLKGHPACCWLLGPRAQGRVFSPYDLDEQIEIILEQLAALPQIKVVLLNLVAEAEINQR
ILATLTARLPQLAIAPDADPDPELPELPQHIIVRCLPSLDPVIAPGCHWEEDLEAAVKQAIALSKPGT
>Mature_388_residues
MELLEYQAKQLFEQVGIPTLPSQIIADPRELKQLQIPYPIVLKSQVRAGGRGKAGGIKRVQNTIDAIAAARNIFNLAIAG
QYPDVLLAEAHYERKQEIFLAVVLDYELQRPVLLGSAHGGMEIDQLLANLHQVVIKDFFSPFQARHLLNKMGIRGALVPA
LSDIIKKMYDLLLAKDLELVEINPLGINQAGELMALDGKVTVHDTALRKHPEIALFYEHQNQLSFTPEAAPLSWQHDVQG
GAVGIVCYGVGAAAVIWDMLHDLKGHPACCWLLGPRAQGRVFSPYDLDEQIEIILEQLAALPQIKVVLLNLVAEAEINQR
ILATLTARLPQLAIAPDADPDPELPELPQHIIVRCLPSLDPVIAPGCHWEEDLEAAVKQAIALSKPGT

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0045

COG function: function code C; Succinyl-CoA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI157779135, Length=339, Percent_Identity=27.4336283185841, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI294862256, Length=339, Percent_Identity=27.4336283185841, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI11321583, Length=293, Percent_Identity=25.938566552901, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI1786948, Length=327, Percent_Identity=31.4984709480122, Blast_Score=141, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI17539378, Length=337, Percent_Identity=23.7388724035608, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17567829, Length=249, Percent_Identity=23.6947791164659, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321683, Length=324, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356231, Length=336, Percent_Identity=26.1904761904762, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI161078106, Length=332, Percent_Identity=24.3975903614458, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24645208, Length=332, Percent_Identity=24.3975903614458, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281361397, Length=332, Percent_Identity=24.6987951807229, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281361395, Length=332, Percent_Identity=24.6987951807229, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2361 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013650
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005811
- InterPro:   IPR017866
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF00549 Ligase_CoA [H]

EC number: =6.2.1.5 [H]

Molecular weight: Translated: 42621; Mature: 42621

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLEYQAKQLFEQVGIPTLPSQIIADPRELKQLQIPYPIVLKSQVRAGGRGKAGGIKRV
CCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCCCEEEHHHHCCCCCCCCCHHHHH
QNTIDAIAAARNIFNLAIAGQYPDVLLAEAHYERKQEIFLAVVLDYELQRPVLLGSAHGG
HHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCCCC
MEIDQLLANLHQVVIKDFFSPFQARHLLNKMGIRGALVPALSDIIKKMYDLLLAKDLELV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
EINPLGINQAGELMALDGKVTVHDTALRKHPEIALFYEHQNQLSFTPEAAPLSWQHDVQG
EECCCCCCCCCCEEEECCEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
GAVGIVCYGVGAAAVIWDMLHDLKGHPACCWLLGPRAQGRVFSPYDLDEQIEIILEQLAA
CEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LPQIKVVLLNLVAEAEINQRILATLTARLPQLAIAPDADPDPELPELPQHIIVRCLPSLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCC
PVIAPGCHWEEDLEAAVKQAIALSKPGT
CCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELLEYQAKQLFEQVGIPTLPSQIIADPRELKQLQIPYPIVLKSQVRAGGRGKAGGIKRV
CCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCCCEEEHHHHCCCCCCCCCHHHHH
QNTIDAIAAARNIFNLAIAGQYPDVLLAEAHYERKQEIFLAVVLDYELQRPVLLGSAHGG
HHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCCCC
MEIDQLLANLHQVVIKDFFSPFQARHLLNKMGIRGALVPALSDIIKKMYDLLLAKDLELV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
EINPLGINQAGELMALDGKVTVHDTALRKHPEIALFYEHQNQLSFTPEAAPLSWQHDVQG
EECCCCCCCCCCEEEECCEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
GAVGIVCYGVGAAAVIWDMLHDLKGHPACCWLLGPRAQGRVFSPYDLDEQIEIILEQLAA
CEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LPQIKVVLLNLVAEAEINQRILATLTARLPQLAIAPDADPDPELPELPQHIIVRCLPSLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCC
PVIAPGCHWEEDLEAAVKQAIALSKPGT
CCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]