Click here to switch to the map view.

The map label for this gene is cmpA [H]

Identifier: 170077482

GI number: 170077482

Start: 887965

End: 889602

Strand: Direct

Name: cmpA [H]

Synonym: SYNPCC7002_A0860

Alternate gene names: 170077482

Gene position: 887965-889602 (Clockwise)

Preceding gene: 170077481

Following gene: 170077483

Centisome position: 29.52

GC content: 49.63

Gene sequence:

>1638_bases
ATGACTCTGATTTCAGCACAGCAGGCTTTACAGGGACTAGGGGGTTCCGACTCTTTCGGTGGCAGGCGCTCGAACTTACA
GTCTTTGTGTCATGTTTGTGGAAAATACCATGGCGCGAGTGATCACTGGCAGTTTATGCAGACGATGCCCCAAGATCCTG
TAGAAATGGTTGATGACCTCGTAAAAATGGGGATTTATAAAGAGAATCAGTTGCGGGCTGCAGAAGGAGTAAATGCCTAC
GAACTGAGAAAAACTTTATTTTTGAAGCGCATTGGTCGCAGTGATCCAAAGCGAGAGAAGCTGATCTTGGCCCTCTGTAA
GCAGGCTGGCGGGATGGAAAATGCTTTTGCGGCGGCCTTTGGGCCCCAAGCTGGTCTATTTTTTGCGGACTCAATTCGTA
GTAGTCAACAGACCCGTCGAGAATTTCTGCGGAATATGGCCGTTGGTGCTGCCCTTGTGAGTTTAGCAAGTTGTGGTCAG
GATACAACGCCCCCTGCGGCAGACACTCCGGCAGATGCGCCAGTGGGTAATTTGGAGAAAACTGATTTACAGATTGGTTT
TATTCCCATTACCTGTGCGACGCCCATTATTATGTCTGAGCCTTTGGGCTTTTACGAAAAGTATGGTTTTAATGCCAAGG
TCGTCAAAATGCCGAGCTGGGGGGCCGTCAGAGATTCGGCGATCGCCGGCGAATTGGATGCCTATCACATGCTGGCTCCG
ATGCCCATTGCGATGACTCTAGGTCTTGGTTCCGAGGCATTTGGCGTGAAGTTGGCAAGTATTGAAAATATCAATGGTCA
AGCAATCACAGTTGCTGAAAAATATAAGGGGCAGGTAAATGGACCTGCCGACTTTAGGGGCTTTACCATTGGGGTTCCCT
TCCCTTACTCAATGCACAATCTCCTGTTGCGTTACTACCTGGCGACGGGCGGCATTGATCCTGATGTGGATGTTCAAATT
CGTCCTGTTCCCCCGCCAGATAGTATTGCTCAGTTGGTAGCGGGTGATATCGACGCATACTTGATGCCTGATCCGTTTAA
CCAGCGGGCCGTGTACGAAGGTGCAGGCTTTATCCACATGTTGACTAAAGAAATTTGGCCAGGTCATCCTTGTTGCGCTT
TTGCCGCGAGTGATCAGTGGATTGACGCCAACCCCAATACCTTCCGTGCCCTTAACAAGTCCATTATCGAAGCGGCTGCT
TACGCTCAAGTCCCTGAAAATCGTCCAGAAATTGCCAGAGCGATTTCCGAGCGGGCCTTCCTTAACCAGCCTGTGGAAGT
TGTCGAAGCAGTTCTCACTGGCAAGTTTGACGATGGTAATGGCAATAGCCTTGATATTCCTGACCGAATCGGCTTTGATC
CCTATCCTTGGCAGAGTTTTGCAAACTGGATTTCTTCCCAGCTTGTGCGTTGGGATCTTCAGGGTGACGGATTGGCTCCC
ACAATTATTCCTGAGACTGGCTATGACACTGTTGGTACAGATGTCTTCCTCACTGATTTAGCAAGAGAACTGGCAACTGA
GCTTGGTCAGACACCGCCCACTGAGATCTATCGCGAGGAGACCCTCAAATTTGACACCTTCGATCCCGCTGATCCTGCGG
CTTATGTGCAACAGCAAATCGATGAATATGGCGTGTAA

Upstream 100 bases:

>100_bases
CAACTCTTAATAAATAAAAGTACTTTTCTGAGTTTTAGGGCTCTTTCAAAATTCTGCGGTTTTGAAAGTTTAAGTTGTTA
TTTTTGGGTAGATATAAATT

Downstream 100 bases:

>100_bases
TTTTTAGGAGGTTTTTTATTATGGCAGTCACAAGTAAACGACTACCAACATCAGCTTACGCTAGGCCGAAAGAGTCCCTT
TGGCAAAATGAGAATTTTCT

Product: putative cyanate ABC transporter, substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MTLISAQQALQGLGGSDSFGGRRSNLQSLCHVCGKYHGASDHWQFMQTMPQDPVEMVDDLVKMGIYKENQLRAAEGVNAY
ELRKTLFLKRIGRSDPKREKLILALCKQAGGMENAFAAAFGPQAGLFFADSIRSSQQTRREFLRNMAVGAALVSLASCGQ
DTTPPAADTPADAPVGNLEKTDLQIGFIPITCATPIIMSEPLGFYEKYGFNAKVVKMPSWGAVRDSAIAGELDAYHMLAP
MPIAMTLGLGSEAFGVKLASIENINGQAITVAEKYKGQVNGPADFRGFTIGVPFPYSMHNLLLRYYLATGGIDPDVDVQI
RPVPPPDSIAQLVAGDIDAYLMPDPFNQRAVYEGAGFIHMLTKEIWPGHPCCAFAASDQWIDANPNTFRALNKSIIEAAA
YAQVPENRPEIARAISERAFLNQPVEVVEAVLTGKFDDGNGNSLDIPDRIGFDPYPWQSFANWISSQLVRWDLQGDGLAP
TIIPETGYDTVGTDVFLTDLARELATELGQTPPTEIYREETLKFDTFDPADPAAYVQQQIDEYGV

Sequences:

>Translated_545_residues
MTLISAQQALQGLGGSDSFGGRRSNLQSLCHVCGKYHGASDHWQFMQTMPQDPVEMVDDLVKMGIYKENQLRAAEGVNAY
ELRKTLFLKRIGRSDPKREKLILALCKQAGGMENAFAAAFGPQAGLFFADSIRSSQQTRREFLRNMAVGAALVSLASCGQ
DTTPPAADTPADAPVGNLEKTDLQIGFIPITCATPIIMSEPLGFYEKYGFNAKVVKMPSWGAVRDSAIAGELDAYHMLAP
MPIAMTLGLGSEAFGVKLASIENINGQAITVAEKYKGQVNGPADFRGFTIGVPFPYSMHNLLLRYYLATGGIDPDVDVQI
RPVPPPDSIAQLVAGDIDAYLMPDPFNQRAVYEGAGFIHMLTKEIWPGHPCCAFAASDQWIDANPNTFRALNKSIIEAAA
YAQVPENRPEIARAISERAFLNQPVEVVEAVLTGKFDDGNGNSLDIPDRIGFDPYPWQSFANWISSQLVRWDLQGDGLAP
TIIPETGYDTVGTDVFLTDLARELATELGQTPPTEIYREETLKFDTFDPADPAAYVQQQIDEYGV
>Mature_544_residues
TLISAQQALQGLGGSDSFGGRRSNLQSLCHVCGKYHGASDHWQFMQTMPQDPVEMVDDLVKMGIYKENQLRAAEGVNAYE
LRKTLFLKRIGRSDPKREKLILALCKQAGGMENAFAAAFGPQAGLFFADSIRSSQQTRREFLRNMAVGAALVSLASCGQD
TTPPAADTPADAPVGNLEKTDLQIGFIPITCATPIIMSEPLGFYEKYGFNAKVVKMPSWGAVRDSAIAGELDAYHMLAPM
PIAMTLGLGSEAFGVKLASIENINGQAITVAEKYKGQVNGPADFRGFTIGVPFPYSMHNLLLRYYLATGGIDPDVDVQIR
PVPPPDSIAQLVAGDIDAYLMPDPFNQRAVYEGAGFIHMLTKEIWPGHPCCAFAASDQWIDANPNTFRALNKSIIEAAAY
AQVPENRPEIARAISERAFLNQPVEVVEAVLTGKFDDGNGNSLDIPDRIGFDPYPWQSFANWISSQLVRWDLQGDGLAPT
IIPETGYDTVGTDVFLTDLARELATELGQTPPTEIYREETLKFDTFDPADPAAYVQQQIDEYGV

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Binds bicarbonate with high affinity [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59462; Mature: 59331

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLISAQQALQGLGGSDSFGGRRSNLQSLCHVCGKYHGASDHWQFMQTMPQDPVEMVDDL
CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHH
VKMGIYKENQLRAAEGVNAYELRKTLFLKRIGRSDPKREKLILALCKQAGGMENAFAAAF
HHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHC
GPQAGLFFADSIRSSQQTRREFLRNMAVGAALVSLASCGQDTTPPAADTPADAPVGNLEK
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TDLQIGFIPITCATPIIMSEPLGFYEKYGFNAKVVKMPSWGAVRDSAIAGELDAYHMLAP
CCEEEEEEEHHHCCCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHCC
MPIAMTLGLGSEAFGVKLASIENINGQAITVAEKYKGQVNGPADFRGFTIGVPFPYSMHN
CCCEEEECCCCHHHCEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCEEEECCCCHHHHH
LLLRYYLATGGIDPDVDVQIRPVPPPDSIAQLVAGDIDAYLMPDPFNQRAVYEGAGFIHM
HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCHHHH
LTKEIWPGHPCCAFAASDQWIDANPNTFRALNKSIIEAAAYAQVPENRPEIARAISERAF
HHHHHCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LNQPVEVVEAVLTGKFDDGNGNSLDIPDRIGFDPYPWQSFANWISSQLVRWDLQGDGLAP
HCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHEEEECCCCCCCC
TIIPETGYDTVGTDVFLTDLARELATELGQTPPTEIYREETLKFDTFDPADPAAYVQQQI
EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEECCCCCCCHHHHHHHHH
DEYGV
HHCCC
>Mature Secondary Structure 
TLISAQQALQGLGGSDSFGGRRSNLQSLCHVCGKYHGASDHWQFMQTMPQDPVEMVDDL
CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHH
VKMGIYKENQLRAAEGVNAYELRKTLFLKRIGRSDPKREKLILALCKQAGGMENAFAAAF
HHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHC
GPQAGLFFADSIRSSQQTRREFLRNMAVGAALVSLASCGQDTTPPAADTPADAPVGNLEK
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TDLQIGFIPITCATPIIMSEPLGFYEKYGFNAKVVKMPSWGAVRDSAIAGELDAYHMLAP
CCEEEEEEEHHHCCCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHCC
MPIAMTLGLGSEAFGVKLASIENINGQAITVAEKYKGQVNGPADFRGFTIGVPFPYSMHN
CCCEEEECCCCHHHCEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCEEEECCCCHHHHH
LLLRYYLATGGIDPDVDVQIRPVPPPDSIAQLVAGDIDAYLMPDPFNQRAVYEGAGFIHM
HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCHHHH
LTKEIWPGHPCCAFAASDQWIDANPNTFRALNKSIIEAAAYAQVPENRPEIARAISERAF
HHHHHCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LNQPVEVVEAVLTGKFDDGNGNSLDIPDRIGFDPYPWQSFANWISSQLVRWDLQGDGLAP
HCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHEEEECCCCCCCC
TIIPETGYDTVGTDVFLTDLARELATELGQTPPTEIYREETLKFDTFDPADPAAYVQQQI
EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEECCCCCCCHHHHHHHHH
DEYGV
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]