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The map label for this gene is dppB [C]

Identifier: 170077447

GI number: 170077447

Start: 850469

End: 851419

Strand: Direct

Name: dppB [C]

Synonym: SYNPCC7002_A0825

Alternate gene names: 170077447

Gene position: 850469-851419 (Clockwise)

Preceding gene: 170077446

Following gene: 170077454

Centisome position: 28.27

GC content: 52.05

Gene sequence:

>951_bases
ATGCGCACTCTTCTAAAACGTTTGGCGATCGCCCTGGGGACATTGCTTGCCATTAGTTTTGTGATTTTCACGATTTTGGC
CTTGGCACCGGGGGACCCCCTCAGTGAATTTGCAAATAATCCGGCGATCACCGCAGAGGTGCGGGAAAATATCCGGCGAT
CGCTGGGCCTGGATCAGCCCTTTTATCTTCGTTATGTCAAATGGCTCTGGGCGCTGGGCCAGGGGAATTTGGGCTATTCT
TTTACGAGTAAAAGTCCTGTGCTGGGTCTGATTTGGCAACGCCTGCCGACGACCCTCTGGGTGGTGGGTCTTGCCTACGG
TTTGAGTGTGGCGATCGCCTTACCCCTGGGGATTATTTCTGCCCTGCGCCGCAACTCTCTTTTGGATCAACTGGCCACCA
CCTTTGCTTTTTTGGGGTATTCCCTACCCACTTTTTTCACGGGTTTGCTAGCGATCATTATCTTTAGCGTGAAATTGCAG
TGGCTCCCCTCGCTATACAACAGCACCCTGGTGGTCAATGACTTTCAAAGTTTTTGGCAGCAGATCCAGCAATCGATCCT
GCCGATCACCGTCCTTGCGTTGTACCAAACGGCAATTTTGACCCGGTTTGTGCGCAATGCGATCCTCGAAGAGTTGCCCC
AGGATTATGTGCGGACGGCCTATGCTAAGGGCTTAGGGGAATTTGCCGTGCTCCGCAAACATATTTTGCGCAATGCTTTG
ATTCCCGTTGTCACTCTGATTGCCATTGATGTGCCGAGCATTGTGACGGGGGCCTTGGTGACAGAGCAAATTTTTCGGGT
GCCGGGGATTGGCGCACTGCTCATTGAATCCATTAACCGCAACGATACCCCCGTGATCATGGGCATCACGATTATCTATG
CGGCCTTGGTGGTGATCTTTAATGCGATCGCCGATCTAAGTTACCGTTTCCTCGACCCCCGCATTAAGTAA

Upstream 100 bases:

>100_bases
TTGGCGGCCTACCACGACGGCACCGCTGTGGGGGATACCCTGGAATGGCAACTGGAACCGGGGGTCGGTTGTCTCTAGGG
AAGAGGGGAGGCCGATGGTG

Downstream 100 bases:

>100_bases
CAAAACAATCCTCCCTTAAGGGAGGTGCCGCAGGCGGAAGGTGTTTATCCCTTGAGTTAACACTCCCCTGACCCCTCTCA
AGAGGGGAAACAGTTGCCGG

Product: permease protein of ABC transporter

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRTLLKRLAIALGTLLAISFVIFTILALAPGDPLSEFANNPAITAEVRENIRRSLGLDQPFYLRYVKWLWALGQGNLGYS
FTSKSPVLGLIWQRLPTTLWVVGLAYGLSVAIALPLGIISALRRNSLLDQLATTFAFLGYSLPTFFTGLLAIIIFSVKLQ
WLPSLYNSTLVVNDFQSFWQQIQQSILPITVLALYQTAILTRFVRNAILEELPQDYVRTAYAKGLGEFAVLRKHILRNAL
IPVVTLIAIDVPSIVTGALVTEQIFRVPGIGALLIESINRNDTPVIMGITIIYAALVVIFNAIADLSYRFLDPRIK

Sequences:

>Translated_316_residues
MRTLLKRLAIALGTLLAISFVIFTILALAPGDPLSEFANNPAITAEVRENIRRSLGLDQPFYLRYVKWLWALGQGNLGYS
FTSKSPVLGLIWQRLPTTLWVVGLAYGLSVAIALPLGIISALRRNSLLDQLATTFAFLGYSLPTFFTGLLAIIIFSVKLQ
WLPSLYNSTLVVNDFQSFWQQIQQSILPITVLALYQTAILTRFVRNAILEELPQDYVRTAYAKGLGEFAVLRKHILRNAL
IPVVTLIAIDVPSIVTGALVTEQIFRVPGIGALLIESINRNDTPVIMGITIIYAALVVIFNAIADLSYRFLDPRIK
>Mature_316_residues
MRTLLKRLAIALGTLLAISFVIFTILALAPGDPLSEFANNPAITAEVRENIRRSLGLDQPFYLRYVKWLWALGQGNLGYS
FTSKSPVLGLIWQRLPTTLWVVGLAYGLSVAIALPLGIISALRRNSLLDQLATTFAFLGYSLPTFFTGLLAIIIFSVKLQ
WLPSLYNSTLVVNDFQSFWQQIQQSILPITVLALYQTAILTRFVRNAILEELPQDYVRTAYAKGLGEFAVLRKHILRNAL
IPVVTLIAIDVPSIVTGALVTEQIFRVPGIGALLIESINRNDTPVIMGITIIYAALVVIFNAIADLSYRFLDPRIK

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=332, Percent_Identity=32.5301204819277, Blast_Score=201, Evalue=8e-53,
Organism=Escherichia coli, GI1787053, Length=313, Percent_Identity=35.4632587859425, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1789888, Length=319, Percent_Identity=36.3636363636364, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=36.0759493670886, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787497, Length=319, Percent_Identity=30.7210031347962, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=29.0858725761773, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=29.4776119402985, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35060; Mature: 35060

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLKRLAIALGTLLAISFVIFTILALAPGDPLSEFANNPAITAEVRENIRRSLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEHHHHHHHHHHCCCCCH
FYLRYVKWLWALGQGNLGYSFTSKSPVLGLIWQRLPTTLWVVGLAYGLSVAIALPLGIIS
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRRNSLLDQLATTFAFLGYSLPTFFTGLLAIIIFSVKLQWLPSLYNSTLVVNDFQSFWQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHH
QIQQSILPITVLALYQTAILTRFVRNAILEELPQDYVRTAYAKGLGEFAVLRKHILRNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPVVTLIAIDVPSIVTGALVTEQIFRVPGIGALLIESINRNDTPVIMGITIIYAALVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
NAIADLSYRFLDPRIK
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRTLLKRLAIALGTLLAISFVIFTILALAPGDPLSEFANNPAITAEVRENIRRSLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEHHHHHHHHHHCCCCCH
FYLRYVKWLWALGQGNLGYSFTSKSPVLGLIWQRLPTTLWVVGLAYGLSVAIALPLGIIS
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRRNSLLDQLATTFAFLGYSLPTFFTGLLAIIIFSVKLQWLPSLYNSTLVVNDFQSFWQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHH
QIQQSILPITVLALYQTAILTRFVRNAILEELPQDYVRTAYAKGLGEFAVLRKHILRNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPVVTLIAIDVPSIVTGALVTEQIFRVPGIGALLIESINRNDTPVIMGITIIYAALVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
NAIADLSYRFLDPRIK
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA