| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077309
Identifier: 170077309
GI number: 170077309
Start: 714555
End: 715337
Strand: Reverse
Name: 170077309
Synonym: SYNPCC7002_A0686
Alternate gene names: NA
Gene position: 715337-714555 (Counterclockwise)
Preceding gene: 170077310
Following gene: 170077308
Centisome position: 23.78
GC content: 51.21
Gene sequence:
>783_bases ATGGGCAAGTATTGGCGCATTTTAGGACTGTTTTGGAGTACGGCGATCGCCGCCGAATTGGAGTATCGTTTAAATTTTTT CATTGCGGCCCTCAGTAGTGTGGGGAATTTGGCGGGCAGCCTGTTCAGCCTCTTTTTGTTTTACCGCACGGGGTATCAAT TTTCCGGTTGGACTTGGCAAGAGGCGATGCTGGTGGTGGGCATGTTTACCCTCTTGCAGGGGGTGGCCAATACTTTTTTT TCGCCGAATCTCAACCGGATCGTGCAACAGGTACAGGAAGGCACCCTCGATTTTGTGCTGCTCAAGCCCATCAGTAGTCA ATTTTGGCTCTCGGCGCGGATGATTTCCCCCTGGGGCTTGCCTGACTTGGTTTTAGGACTGGGAATTTTGGTCTACATCG GGCTGCAGTTGGGTCTGTCACCGCTCAATTATGTGTTGAGTCTGGTTCCCATCGGGTTTGGGATGTTGATCCTCTACAGC CTCTGGTTTATGTTGGGGGCAACGAGTATCTGGTTTGTGAAAATTTATAATGTCACCGAGGTGCTGCGGGGTTTCCTTGA GGCGGGGCGTTACCCGATTGTGGCCTATCCGGGGGTCTTTCGTTTTTTCTTTACCTTCATTGTCCCCATTGTTTTTTTAA CGACCATTCCTGCGGAAACCATGTTGGGGCGATCGCCTCTGGGGTGGATTGCTGGTGCCGGTTGTTTGGGCCTGCTGCTG CTGTTATTGTCTAATGTGGTGTGGCGGTTTGCCCTACGGTTTTATACCAGTGCTTCTAGCTGA
Upstream 100 bases:
>100_bases AAGGTCAAAATTGGCCATACCTTGCGCCTTGAGGGGTTTAATTACGATTTCAATGGCAGCGTGATTGATATCCGGGCAGT GGAGAAATAGGCTCGACTCC
Downstream 100 bases:
>100_bases AGCCTTAGCAAGAATTTAAACTTTGTCTCCTAGACTGCCGTTGTATGAAAAGAAAACCCATCCTATCGACCATTGGTTGG CGAGAATGTGTGGCGCTCCC
Product: ABC transporter permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGKYWRILGLFWSTAIAAELEYRLNFFIAALSSVGNLAGSLFSLFLFYRTGYQFSGWTWQEAMLVVGMFTLLQGVANTFF SPNLNRIVQQVQEGTLDFVLLKPISSQFWLSARMISPWGLPDLVLGLGILVYIGLQLGLSPLNYVLSLVPIGFGMLILYS LWFMLGATSIWFVKIYNVTEVLRGFLEAGRYPIVAYPGVFRFFFTFIVPIVFLTTIPAETMLGRSPLGWIAGAGCLGLLL LLLSNVVWRFALRFYTSASS
Sequences:
>Translated_260_residues MGKYWRILGLFWSTAIAAELEYRLNFFIAALSSVGNLAGSLFSLFLFYRTGYQFSGWTWQEAMLVVGMFTLLQGVANTFF SPNLNRIVQQVQEGTLDFVLLKPISSQFWLSARMISPWGLPDLVLGLGILVYIGLQLGLSPLNYVLSLVPIGFGMLILYS LWFMLGATSIWFVKIYNVTEVLRGFLEAGRYPIVAYPGVFRFFFTFIVPIVFLTTIPAETMLGRSPLGWIAGAGCLGLLL LLLSNVVWRFALRFYTSASS >Mature_259_residues GKYWRILGLFWSTAIAAELEYRLNFFIAALSSVGNLAGSLFSLFLFYRTGYQFSGWTWQEAMLVVGMFTLLQGVANTFFS PNLNRIVQQVQEGTLDFVLLKPISSQFWLSARMISPWGLPDLVLGLGILVYIGLQLGLSPLNYVLSLVPIGFGMLILYSL WFMLGATSIWFVKIYNVTEVLRGFLEAGRYPIVAYPGVFRFFFTFIVPIVFLTTIPAETMLGRSPLGWIAGAGCLGLLLL LLSNVVWRFALRFYTSASS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29161; Mature: 29030
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYWRILGLFWSTAIAAELEYRLNFFIAALSSVGNLAGSLFSLFLFYRTGYQFSGWTWQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EAMLVVGMFTLLQGVANTFFSPNLNRIVQQVQEGTLDFVLLKPISSQFWLSARMISPWGL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCC PDLVLGLGILVYIGLQLGLSPLNYVLSLVPIGFGMLILYSLWFMLGATSIWFVKIYNVTE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLRGFLEAGRYPIVAYPGVFRFFFTFIVPIVFLTTIPAETMLGRSPLGWIAGAGCLGLLL HHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHH LLLSNVVWRFALRFYTSASS HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GKYWRILGLFWSTAIAAELEYRLNFFIAALSSVGNLAGSLFSLFLFYRTGYQFSGWTWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EAMLVVGMFTLLQGVANTFFSPNLNRIVQQVQEGTLDFVLLKPISSQFWLSARMISPWGL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCC PDLVLGLGILVYIGLQLGLSPLNYVLSLVPIGFGMLILYSLWFMLGATSIWFVKIYNVTE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLRGFLEAGRYPIVAYPGVFRFFFTFIVPIVFLTTIPAETMLGRSPLGWIAGAGCLGLLL HHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHH LLLSNVVWRFALRFYTSASS HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA