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The map label for this gene is rimK [H]

Identifier: 170077308

GI number: 170077308

Start: 714052

End: 714510

Strand: Reverse

Name: rimK [H]

Synonym: SYNPCC7002_A0685

Alternate gene names: 170077308

Gene position: 714510-714052 (Counterclockwise)

Preceding gene: 170077309

Following gene: 170077307

Centisome position: 23.75

GC content: 51.42

Gene sequence:

>459_bases
ATGAAAAGAAAACCCATCCTATCGACCATTGGTTGGCGAGAATGTGTGGCGCTCCCGGATTTTCAGATCCCCGTGATTCG
CGCCAAAATTGACACCGGTGCTGGCTCCTCTTCGATCCATGCCACCCGCATTCACTATTTTCACCAAGGCGATCGCGAGA
TGGTTCGTTTCCAAATTCACCCCCACCAGCACAATATCCATGACACCGTTACCATAGAAGCCCCTTTGGTCGAACACCGC
AGCATCAAAAGTTCCAATGGCCAAAAGCAACTGCGGCCCGTCATCGAAACCCATGTTCAACTAGGCGAACACCGTTGGCT
CATTGAACTCAATCTCACCAATCGCTCCTTAATGGGTTATCGGATGCTCCTTGGACGCCAGGCCCTGCGCAAACGATTCC
TCGTTGATGTGAGCAAATCTTTTCTCCAAAGCCAACCGGATCATCCCCACCAACCATGA

Upstream 100 bases:

>100_bases
TGTCTAATGTGGTGTGGCGGTTTGCCCTACGGTTTTATACCAGTGCTTCTAGCTGAAGCCTTAGCAAGAATTTAAACTTT
GTCTCCTAGACTGCCGTTGT

Downstream 100 bases:

>100_bases
AAATTGCTATTCTCTCCCAAGATCCAAAACTCTATTCCACCCGTCGTCTCCGGGAAGCCGCCGAAAATCGCCACCACGAC
GTCCAGGTGATTAATTTCAT

Product: ribosomal protein S6 modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKRKPILSTIGWRECVALPDFQIPVIRAKIDTGAGSSSIHATRIHYFHQGDREMVRFQIHPHQHNIHDTVTIEAPLVEHR
SIKSSNGQKQLRPVIETHVQLGEHRWLIELNLTNRSLMGYRMLLGRQALRKRFLVDVSKSFLQSQPDHPHQP

Sequences:

>Translated_152_residues
MKRKPILSTIGWRECVALPDFQIPVIRAKIDTGAGSSSIHATRIHYFHQGDREMVRFQIHPHQHNIHDTVTIEAPLVEHR
SIKSSNGQKQLRPVIETHVQLGEHRWLIELNLTNRSLMGYRMLLGRQALRKRFLVDVSKSFLQSQPDHPHQP
>Mature_152_residues
MKRKPILSTIGWRECVALPDFQIPVIRAKIDTGAGSSSIHATRIHYFHQGDREMVRFQIHPHQHNIHDTVTIEAPLVEHR
SIKSSNGQKQLRPVIETHVQLGEHRWLIELNLTNRSLMGYRMLLGRQALRKRFLVDVSKSFLQSQPDHPHQP

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 17641; Mature: 17641

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKPILSTIGWRECVALPDFQIPVIRAKIDTGAGSSSIHATRIHYFHQGDREMVRFQIH
CCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEEC
PHQHNIHDTVTIEAPLVEHRSIKSSNGQKQLRPVIETHVQLGEHRWLIELNLTNRSLMGY
CCCCCCCEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
RMLLGRQALRKRFLVDVSKSFLQSQPDHPHQP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKRKPILSTIGWRECVALPDFQIPVIRAKIDTGAGSSSIHATRIHYFHQGDREMVRFQIH
CCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEEC
PHQHNIHDTVTIEAPLVEHRSIKSSNGQKQLRPVIETHVQLGEHRWLIELNLTNRSLMGY
CCCCCCCEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
RMLLGRQALRKRFLVDVSKSFLQSQPDHPHQP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA