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The map label for this gene is rimK

Identifier: 170077307

GI number: 170077307

Start: 713150

End: 714055

Strand: Reverse

Name: rimK

Synonym: SYNPCC7002_A0684

Alternate gene names: 170077307

Gene position: 714055-713150 (Counterclockwise)

Preceding gene: 170077308

Following gene: 170077305

Centisome position: 23.74

GC content: 53.09

Gene sequence:

>906_bases
ATGAAAATTGCTATTCTCTCCCAAGATCCAAAACTCTATTCCACCCGTCGTCTCCGGGAAGCCGCCGAAAATCGCCACCA
CGACGTCCAGGTGATTAATTTCATGCGCTGCTACATGAACATCACTTCCCATCAACCCTTTGTCATTTACCAGGGGCAGC
GGTTAGAAAATTTTGACGCGATTATTCCTCGCATTGGAGCATCGGCCACCTTTTACGGTACGGCGGTGGTGCGTCAGTTT
GAAGTGATGGGAGGGTTTAGTGCCAATACATCCCAGGCGATTTCTCGGTCCCGCGATAAACTGCGATCGCTGCAAATTTT
AGCCCGCAAAGGCATTGGACTCCCGGTGACAGGCTTTGCCCACGCGACCCAGGACATTGATGGCCTCATCGAAACCGTGG
GTGGTGCTCCTGTCGTCATTAAACTTTTAGAAGGCACCCAGGGTATTGGTGTGGTGCTCGCGGAAACCCACCAGGCCGCC
AAATCCGTGATCGAAGCCTTTCGGGGGTTGGATGCCAACATTTTGGTGCAAGAATACATCGCCGAAGCCAAGGGCACGGA
TATCCGCTGTTTTGTGGTGGGCGAGAAAGTCGTGGCGGCAATGAAGCGCCAGGGAGCAGAGGGAGAATTTCGGTCTAATT
TGCACCGGGGCGGCAAAGCGGACAAAGTTCGACTCACCCCCGAAGAGCGCAGTACCGCTGTCCGGGCCGCTAAAGCGATG
GGATTGCGGGTCGCCGGGGTAGATTTGTTGCGCTCAAACCATGGGCCTTTGGTGATGGAAATTAACTCTTCACCGGGATT
AGAAGGCATCGAAAAAACCACCGGGGTTGATGTGGCCGGAAAAATTATTGAATATCTCGAAAAGAATGCCGCTCCTGGGA
AAACCACCGATCGCATTCAGTATTAG

Upstream 100 bases:

>100_bases
GTTATCGGATGCTCCTTGGACGCCAGGCCCTGCGCAAACGATTCCTCGTTGATGTGAGCAAATCTTTTCTCCAAAGCCAA
CCGGATCATCCCCACCAACC

Downstream 100 bases:

>100_bases
AGGTCAGATTTTTGCCCACGGGCTAGAAGAAAAGCTGCAAAATTGTCTCAAGGCGATCGCCCCAGGCAAGTTCATCGTGG
CGACCAAGGGGATCTTCAAG

Product: ribosomal protein S6 modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKIAILSQDPKLYSTRRLREAAENRHHDVQVINFMRCYMNITSHQPFVIYQGQRLENFDAIIPRIGASATFYGTAVVRQF
EVMGGFSANTSQAISRSRDKLRSLQILARKGIGLPVTGFAHATQDIDGLIETVGGAPVVIKLLEGTQGIGVVLAETHQAA
KSVIEAFRGLDANILVQEYIAEAKGTDIRCFVVGEKVVAAMKRQGAEGEFRSNLHRGGKADKVRLTPEERSTAVRAAKAM
GLRVAGVDLLRSNHGPLVMEINSSPGLEGIEKTTGVDVAGKIIEYLEKNAAPGKTTDRIQY

Sequences:

>Translated_301_residues
MKIAILSQDPKLYSTRRLREAAENRHHDVQVINFMRCYMNITSHQPFVIYQGQRLENFDAIIPRIGASATFYGTAVVRQF
EVMGGFSANTSQAISRSRDKLRSLQILARKGIGLPVTGFAHATQDIDGLIETVGGAPVVIKLLEGTQGIGVVLAETHQAA
KSVIEAFRGLDANILVQEYIAEAKGTDIRCFVVGEKVVAAMKRQGAEGEFRSNLHRGGKADKVRLTPEERSTAVRAAKAM
GLRVAGVDLLRSNHGPLVMEINSSPGLEGIEKTTGVDVAGKIIEYLEKNAAPGKTTDRIQY
>Mature_301_residues
MKIAILSQDPKLYSTRRLREAAENRHHDVQVINFMRCYMNITSHQPFVIYQGQRLENFDAIIPRIGASATFYGTAVVRQF
EVMGGFSANTSQAISRSRDKLRSLQILARKGIGLPVTGFAHATQDIDGLIETVGGAPVVIKLLEGTQGIGVVLAETHQAA
KSVIEAFRGLDANILVQEYIAEAKGTDIRCFVVGEKVVAAMKRQGAEGEFRSNLHRGGKADKVRLTPEERSTAVRAAKAM
GLRVAGVDLLRSNHGPLVMEINSSPGLEGIEKTTGVDVAGKIIEYLEKNAAPGKTTDRIQY

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain

Homologues:

Organism=Homo sapiens, GI164663810, Length=213, Percent_Identity=30.9859154929577, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI134254462, Length=227, Percent_Identity=31.2775330396476, Blast_Score=86, Evalue=6e-17,
Organism=Escherichia coli, GI1787076, Length=290, Percent_Identity=63.448275862069, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMK_SYNP2 (B1XQE7)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001733945.1
- GeneID:   6057856
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0684
- HOGENOM:   HBG679591
- OMA:   CREPRLY
- ProtClustDB:   CLSK957518
- GO:   GO:0006412
- HAMAP:   MF_01552
- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR004666
- Gene3D:   G3DSA:3.30.1490.20
- Gene3D:   G3DSA:3.30.470.20
- TIGRFAMs:   TIGR00768

Pfam domain/function: PF08443 RimK

EC number: NA

Molecular weight: Translated: 32770; Mature: 32770

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAILSQDPKLYSTRRLREAAENRHHDVQVINFMRCYMNITSHQPFVIYQGQRLENFDA
CEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
IIPRIGASATFYGTAVVRQFEVMGGFSANTSQAISRSRDKLRSLQILARKGIGLPVTGFA
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
HATQDIDGLIETVGGAPVVIKLLEGTQGIGVVLAETHQAAKSVIEAFRGLDANILVQEYI
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHH
AEAKGTDIRCFVVGEKVVAAMKRQGAEGEFRSNLHRGGKADKVRLTPEERSTAVRAAKAM
HHCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHH
GLRVAGVDLLRSNHGPLVMEINSSPGLEGIEKTTGVDVAGKIIEYLEKNAAPGKTTDRIQ
CCEEECHHHHHCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
Y
C
>Mature Secondary Structure
MKIAILSQDPKLYSTRRLREAAENRHHDVQVINFMRCYMNITSHQPFVIYQGQRLENFDA
CEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
IIPRIGASATFYGTAVVRQFEVMGGFSANTSQAISRSRDKLRSLQILARKGIGLPVTGFA
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
HATQDIDGLIETVGGAPVVIKLLEGTQGIGVVLAETHQAAKSVIEAFRGLDANILVQEYI
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHH
AEAKGTDIRCFVVGEKVVAAMKRQGAEGEFRSNLHRGGKADKVRLTPEERSTAVRAAKAM
HHCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHH
GLRVAGVDLLRSNHGPLVMEINSSPGLEGIEKTTGVDVAGKIIEYLEKNAAPGKTTDRIQ
CCEEECHHHHHCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA