Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
---|---|
Accession | NC_010470 |
Length | 38,713 |
Click here to switch to the map view.
The map label for this gene is 170016344
Identifier: 170016344
GI number: 170016344
Start: 28318
End: 28422
Strand: Direct
Name: 170016344
Synonym: LCK_p100037
Alternate gene names: NA
Gene position: 28318-28422 (Clockwise)
Preceding gene: 170016343
Following gene: 170016345
Centisome position: 73.15
GC content: 34.29
Gene sequence:
>105_bases GTGTCTGTTTCAGACGCTTTACAGCTCATGTTTATGTTTGGCACTTTTATAGTTGCCTTACTAGCATTGGTTGTTGAGTT GATTAAAAGTCAACAAAAAAAGTAA
Upstream 100 bases:
>100_bases TCGATAGTTAAGTTAAGTGGTGGCTATTCTTTCAACAGAAAAGAGGTGGTGCTTATGGTGTAAAACCTATAAACACGAAC CCTAGGAAAGGAAAAGCCTG
Downstream 100 bases:
>100_bases CCACTTCAACTTTAGACGGTTGCGGTTACTTAATTAAATAATCGGAATAGTCACTGCTTAGCAGGCTATTGATGTTAAAG GGAGTAGTTCGAGCTACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 34; Mature: 33
Protein sequence:
>34_residues MSVSDALQLMFMFGTFIVALLALVVELIKSQQKK
Sequences:
>Translated_34_residues MSVSDALQLMFMFGTFIVALLALVVELIKSQQKK >Mature_33_residues SVSDALQLMFMFGTFIVALLALVVELIKSQQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3801; Mature: 3670
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSDALQLMFMFGTFIVALLALVVELIKSQQKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVSDALQLMFMFGTFIVALLALVVELIKSQQKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA