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The map label for this gene is gidB [H]

Identifier: 170026422

GI number: 170026422

Start: 4657567

End: 4658187

Strand: Direct

Name: gidB [H]

Synonym: YPK_4218

Alternate gene names: 170026422

Gene position: 4657567-4658187 (Clockwise)

Preceding gene: 170026421

Following gene: 170026423

Centisome position: 99.32

GC content: 45.57

Gene sequence:

>621_bases
GTGTTAAAAAAATTAGACTCTCTGCTTACCGTTGCTGGTATTACGTTACCCGATCAGCAAAAACATCAGTTGATTGGCTA
TGTAGAGCTGCTAGACAAGTGGAATAAAGCTTATAACCTGACATCTGTTCGTGATCCACAGCAAATGTTAGTGCGTCATA
TCCTTGATAGCATTGTGGTTAATCCCCATCTGCAAGGCAGCCGATTTATTGATGTCGGAACCGGGCCAGGTCTTCCTGGT
ATCCCTTTGGCTATTGTGCGCCCTGATGCACATTTTACTTTGTTGGATAGCCTGGGTAAGCGGGTTCGCTTTCTACGTCA
GGTGCAACACGAACTGGGGTTAAATAACATTGAGCTGGTTCAGAGCAGAGTTGAGGCATTTACCTCAGAACCGCCATTTG
ATGGTGTGATAAGCCGTGCATTTGCATCCTTACAAGATATGCTCTCGTGGTGTCACCACTTGCCAGCTAAGCCTGAAGGG
CGTTTTTATGCGCTTAAAGGGGTTCGGCCTGATGATGAGTTAGCGGTTCTGCCCGAAGATATTGTTCTTGAGTCGGTGAT
AAAACTGGATGTTCCCGAATTGGATGGAGAGCGGCATTTGATTATTCTTAAGTCAAACTAA

Upstream 100 bases:

>100_bases
TACAGTAAACATATTCAATCCATTACCATGCTGGATTATCATTTTGCCTATTGACCCATTTATATGCTGACTGGGCGTTT
TCTGGTCAGAGGATACCCTT

Downstream 100 bases:

>100_bases
CTTTGCTTTTTATCAAAAAAAGGCAACAAATTATTAGTAGTCGTTAGTAAACTTATTGAGTTCATTGTTTCCAGCATGGG
GAGATCTTTATTTGCTCACT

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSIVVNPHLQGSRFIDVGTGPGLPG
IPLAIVRPDAHFTLLDSLGKRVRFLRQVQHELGLNNIELVQSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAKPEG
RFYALKGVRPDDELAVLPEDIVLESVIKLDVPELDGERHLIILKSN

Sequences:

>Translated_206_residues
MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSIVVNPHLQGSRFIDVGTGPGLPG
IPLAIVRPDAHFTLLDSLGKRVRFLRQVQHELGLNNIELVQSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAKPEG
RFYALKGVRPDDELAVLPEDIVLESVIKLDVPELDGERHLIILKSN
>Mature_206_residues
MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSIVVNPHLQGSRFIDVGTGPGLPG
IPLAIVRPDAHFTLLDSLGKRVRFLRQVQHELGLNNIELVQSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAKPEG
RFYALKGVRPDDELAVLPEDIVLESVIKLDVPELDGERHLIILKSN

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=206, Percent_Identity=77.1844660194175, Blast_Score=326, Evalue=6e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 23113; Mature: 23113

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSIVV
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
NPHLQGSRFIDVGTGPGLPGIPLAIVRPDAHFTLLDSLGKRVRFLRQVQHELGLNNIELV
CCCCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAKPEGRFYALKGVRPDDELAVLPED
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCHH
IVLESVIKLDVPELDGERHLIILKSN
HHHHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSIVV
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
NPHLQGSRFIDVGTGPGLPGIPLAIVRPDAHFTLLDSLGKRVRFLRQVQHELGLNNIELV
CCCCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAKPEGRFYALKGVRPDDELAVLPED
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCHH
IVLESVIKLDVPELDGERHLIILKSN
HHHHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA