| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is mnmG [H]
Identifier: 170026421
GI number: 170026421
Start: 4655533
End: 4657422
Strand: Direct
Name: mnmG [H]
Synonym: YPK_4217
Alternate gene names: 170026421
Gene position: 4655533-4657422 (Clockwise)
Preceding gene: 170026420
Following gene: 170026422
Centisome position: 99.28
GC content: 47.94
Gene sequence:
>1890_bases ATGTTTTATCCAGATCAATTTGACGTCATCATCATCGGTGGTGGCCATGCAGGCACCGAAGCCGCCATGGCCGCGGCACG CATGGGACGTCAGACCTTATTGCTGACGCACAATATCGATACTCTGGGGCAAATGTCTTGTAACCCAGCAATCGGCGGTA TCGGCAAGGGGCACTTGGTCAAAGAAATTGATGCTCTGGGTGGCCTGATGGCGAAAGCAACAGACCTCGCGGGGATCCAG TTTAGGATACTAAACGCCAGCAAAGGGCCTGCGGTAAGAGCAACCCGCGCTCAGGCTGACCGTGTTCTGTATCGTTTAGC GGTACGAACGGCATTGGAGAATCAACCTAACTTGATGATCTTCCAGCAACCTGTTGAAGATCTCATTGTTGAAAATGATC GTGTCGTTGGCGCAGTCACACAAATGGGTCTGAAATTCCGTGCCAAAGCGGTGGTGCTAACTGTTGGTACCTTCCTTGAT GGCAAAATACATATTGGGCTAGAAAATTACAGTGGTGGCCGTGCCGGTGATCCCCCTTCGATCTCATTATCACAACGCTT ACGTGAACTGCCTTTGCGAGTAAATCGCCTTAAAACGGGCACTCCACCACGTATCGATGCGCGAACTATCGACTTTAGCC AATTAACACCTCAGTTGGGTGATACGCCAATTCCAGTATTCTCTTTCTTGGGAAATGCTGAACAACATCCTGAACAAATG GCTTGTCATATCACCTACACCAATGAAAAAACACATGAAGTGATCCGCAATAACCTGGATCGCAGCCCAATGTATGCAGG GATCATCGAAGGGATCGGCCCACGTTACTGCCCATCGATCGAAGATAAAGTCATGCGTTTTGCTGATCGTAATTCACATC AGATCTTCCTCGAACCAGAGGGGCTAACCAGTAACGAGATCTATCCGAACGGCATTTCTACCAGTTTGCCTTTCGATGTA CAGATGCAAATTGTCCGCTCAATGAAAGGGTTGGAAAATGCACGTATTATTCGTCCCGGCTATGCTATCGAATATGATTT CTTTGATCCTCGCGATTTAAAACCGACTCTGGAAAGTAAATATATTCAAGGCTTGTTCTTTGCGGGACAAATCAATGGCA CAACGGGCTACGAGGAAGCTGCGGCTCAAGGGCTGCTTGCAGGGCTTAATGCGGGCCGTTTTGCCAACGAGGAGGACGGA TGGTCACCTCGGCGTGATGAAGCTTACCTTGGCGTGCTGGTGGACGATTTAAGCACTCTCGGCACTAAAGAACCGTACCG TATGTTTACCTCCAGAGCTGAATACCGTTTGATGCTGCGTGAAGATAACGCTGATCTACGCCTGACTGAAACAGGCCGCA AATTGGGATTAGTGGATGATATCCGGTGGGCACATTTCAGCCAAAAAGTTGAACAAATTGAAAAAGAGCGCCAACGGCTG CGTGATATCTGGGTGCACCCGCATTCTGAGAATGTTTCAGAGATCAATGCGCTGCTGAAAGCACCTTTGTCCAAAGAAGC CAACGGAGAAGAGCTACTGCGTCGGCCTGAAATAGACTATCGTTTGTTGACCTCTTTGACATCATTTGGCCCAGCGTTGA CTGATCCACAATCGGCTGATCAAGTTGAAATTCAAGTCAAATATGAAGGGTATATTACTCGTCAGCAGGAAGAGATCGAA AAACAACTACGCAACGAAAATACCTTATTGCCCGTTGATCTCGATTATCAGCAAGTCTCAGGTTTGTCGAATGAAGTCAT TGCCAAATTGAATGACCATAAACCCAGTTCAATTGGTCAGGCATCCCGAATTTCAGGTATTACCCCCGCGGCAATATCTA TCTTACTGGTTTGGCTGAAAAAACAAGGATTGTTGCGCCGCAGTGCGTGA
Upstream 100 bases:
>100_bases AAAGGCGATCCTATGCCACTTGGTCGATCGTCTAAACTTGAGTAGAATCCCCCACCCCAGGGCAAACACAGAAATTCGCA TAACGGCGAGGTGCAGTACC
Downstream 100 bases:
>100_bases CGATTAAACGTTTGCCTGCACCCTGTATTTTACGGTCAGGCAAATACAGTAAACATATTCAATCCATTACCATGCTGGAT TATCATTTTGCCTATTGACC
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDALGGLMAKATDLAGIQ FRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD GKIHIGLENYSGGRAGDPPSISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQM ACHITYTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNEIYPNGISTSLPFDV QMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDG WSPRRDEAYLGVLVDDLSTLGTKEPYRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRL RDIWVHPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQVKYEGYITRQQEEIE KQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRISGITPAAISILLVWLKKQGLLRRSA
Sequences:
>Translated_629_residues MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDALGGLMAKATDLAGIQ FRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD GKIHIGLENYSGGRAGDPPSISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQM ACHITYTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNEIYPNGISTSLPFDV QMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDG WSPRRDEAYLGVLVDDLSTLGTKEPYRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRL RDIWVHPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQVKYEGYITRQQEEIE KQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRISGITPAAISILLVWLKKQGLLRRSA >Mature_629_residues MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDALGGLMAKATDLAGIQ FRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMIFQQPVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD GKIHIGLENYSGGRAGDPPSISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQM ACHITYTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPEGLTSNEIYPNGISTSLPFDV QMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESKYIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDG WSPRRDEAYLGVLVDDLSTLGTKEPYRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRL RDIWVHPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSADQVEIQVKYEGYITRQQEEIE KQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQASRISGITPAAISILLVWLKKQGLLRRSA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=637, Percent_Identity=45.6828885400314, Blast_Score=502, Evalue=1e-142, Organism=Homo sapiens, GI19882217, Length=662, Percent_Identity=43.9577039274924, Blast_Score=488, Evalue=1e-138, Organism=Homo sapiens, GI183227703, Length=677, Percent_Identity=42.9837518463811, Blast_Score=483, Evalue=1e-136, Organism=Escherichia coli, GI2367273, Length=629, Percent_Identity=86.0095389507154, Blast_Score=1120, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=634, Percent_Identity=40.8517350157729, Blast_Score=472, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6321202, Length=620, Percent_Identity=45.6451612903226, Blast_Score=516, Evalue=1e-147, Organism=Drosophila melanogaster, GI24658174, Length=639, Percent_Identity=46.6353677621283, Blast_Score=527, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - InterPro: IPR000048 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 70040; Mature: 70040
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHH KEIDALGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMI HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQPVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPS ECCCHHHHHHCCCCEEEHHHHHCHHHCCEEEEEEEECEECCEEEEEEECCCCCCCCCCCC ISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQM CCHHHHHHHCCHHHHHCCCCCCCCCCEEECCHHHHCCCCCCCCCHHHHHHCCCCCCCCCE ACHITYTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE EEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCC GLTSNEIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCHHHHH YIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTL HHCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDIWVHPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSAD HHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC QVEIQVKYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQ EEEEEEEECCEEECCHHHHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHCCCCCCCCCCC ASRISGITPAAISILLVWLKKQGLLRRSA HHHCCCCCHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHH KEIDALGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMI HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQPVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPS ECCCHHHHHHCCCCEEEHHHHHCHHHCCEEEEEEEECEECCEEEEEEECCCCCCCCCCCC ISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQM CCHHHHHHHCCHHHHHCCCCCCCCCCEEECCHHHHCCCCCCCCCHHHHHHCCCCCCCCCE ACHITYTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE EEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCC GLTSNEIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCHHHHH YIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTL HHCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDIWVHPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSAD HHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC QVEIQVKYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQ EEEEEEEECCEEECCHHHHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHCCCCCCCCCCC ASRISGITPAAISILLVWLKKQGLLRRSA HHHCCCCCHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA