| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026370
Identifier: 170026370
GI number: 170026370
Start: 4593763
End: 4594410
Strand: Direct
Name: 170026370
Synonym: YPK_4163
Alternate gene names: NA
Gene position: 4593763-4594410 (Clockwise)
Preceding gene: 170026369
Following gene: 170026371
Centisome position: 97.96
GC content: 39.66
Gene sequence:
>648_bases ATGAGATTATTAACTGAAAACATGTTTCAACGATTAACTACTCAACGCCTTGTCAGCATTAGCGAGGTGGTTAATTCGCT TTATGGAATAAACCCAAACACAAAAACAAAAGATTTGCCTGATGATATTTCCGAAGAGGCACAAGACATTAAAAAAGCCA TTGCCAGAAATTTAAAAAGCCTTGGAAATTCCTATGTGACCATATCGAGCGAAGTTGATGCTGATTTGGTTTTCGGGGCC GCACATCAATTTTTAGTAGAGGGAATAACGCCTAGGGAAATTATAGATAGAGCCATAGAAGCAGTCTCAGCATACGTGTA TACCAATAATTGGGAAGATATCATGTTTGCCTTTGGTGGTCGTTTACTGGTGGACGATATGACAAAAATTCGAAAGACGG GGCGTGGCAAACACAAAAAAGAAGATGAAGAGAATGGGACACTGAAAATGGTCGGATTGCTGATTAAACTGTTAGCTAAA AACCATGCTAGTAAAAAATATGGCACCAGCGAAGCACCAACAATTACGGAAATATACCGCAGCATCATAGCGTTGGCGGA AGAAGAAAGTATCACCTTAAAAGGCATTGGAAAATCCACATTTGCTAGTAAATCTGCCGCAGCCATACGAGCAACAACAG AGTTTTAA
Upstream 100 bases:
>100_bases AGCGTAAGGCAGCACTGACACAGTGGGCTGCGTTGCTGGTGGCCCTAGAGCGTGGCGAAGAATACAACGTAACTCCGATT AAAAAGCGGAAGGTGACAAT
Downstream 100 bases:
>100_bases ATTAACAATCATAATTTTGATAGATGCTGTACTAGCCCTACTATCTTCTCTTATTGATGGGCTAATGTCCTGTATTGTCG TTCTTTGTCTTGTACTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRLLTENMFQRLTTQRLVSISEVVNSLYGINPNTKTKDLPDDISEEAQDIKKAIARNLKSLGNSYVTISSEVDADLVFGA AHQFLVEGITPREIIDRAIEAVSAYVYTNNWEDIMFAFGGRLLVDDMTKIRKTGRGKHKKEDEENGTLKMVGLLIKLLAK NHASKKYGTSEAPTITEIYRSIIALAEEESITLKGIGKSTFASKSAAAIRATTEF
Sequences:
>Translated_215_residues MRLLTENMFQRLTTQRLVSISEVVNSLYGINPNTKTKDLPDDISEEAQDIKKAIARNLKSLGNSYVTISSEVDADLVFGA AHQFLVEGITPREIIDRAIEAVSAYVYTNNWEDIMFAFGGRLLVDDMTKIRKTGRGKHKKEDEENGTLKMVGLLIKLLAK NHASKKYGTSEAPTITEIYRSIIALAEEESITLKGIGKSTFASKSAAAIRATTEF >Mature_215_residues MRLLTENMFQRLTTQRLVSISEVVNSLYGINPNTKTKDLPDDISEEAQDIKKAIARNLKSLGNSYVTISSEVDADLVFGA AHQFLVEGITPREIIDRAIEAVSAYVYTNNWEDIMFAFGGRLLVDDMTKIRKTGRGKHKKEDEENGTLKMVGLLIKLLAK NHASKKYGTSEAPTITEIYRSIIALAEEESITLKGIGKSTFASKSAAAIRATTEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23819; Mature: 23819
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLTENMFQRLTTQRLVSISEVVNSLYGINPNTKTKDLPDDISEEAQDIKKAIARNLKS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGNSYVTISSEVDADLVFGAAHQFLVEGITPREIIDRAIEAVSAYVYTNNWEDIMFAFGG HCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHCC RLLVDDMTKIRKTGRGKHKKEDEENGTLKMVGLLIKLLAKNHASKKYGTSEAPTITEIYR CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH SIIALAEEESITLKGIGKSTFASKSAAAIRATTEF HHHHHHCCCCEEEEECCCHHHHCCCHHHHEECCCC >Mature Secondary Structure MRLLTENMFQRLTTQRLVSISEVVNSLYGINPNTKTKDLPDDISEEAQDIKKAIARNLKS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGNSYVTISSEVDADLVFGAAHQFLVEGITPREIIDRAIEAVSAYVYTNNWEDIMFAFGG HCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHCC RLLVDDMTKIRKTGRGKHKKEDEENGTLKMVGLLIKLLAKNHASKKYGTSEAPTITEIYR CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH SIIALAEEESITLKGIGKSTFASKSAAAIRATTEF HHHHHHCCCCEEEEECCCHHHHCCCHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA