Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is yhhL [H]
Identifier: 170026192
GI number: 170026192
Start: 4391190
End: 4391462
Strand: Direct
Name: yhhL [H]
Synonym: YPK_3981
Alternate gene names: 170026192
Gene position: 4391190-4391462 (Clockwise)
Preceding gene: 170026191
Following gene: 170026195
Centisome position: 93.64
GC content: 40.66
Gene sequence:
>273_bases ATGTGGATTAATCTCGGCCGGTTACTGATGCTAGGCGTCTGGTTTTTTATACTGCTGAATCTGTTTCAGCCTTACCCTAA GCCATTGAGATACTTTATCCATGTGGCCATGATATTTATGGTTCTGATGCATGGCTTGCAACTGGTCTTGCTCAAATCGA CACAACCCAAGGATCAACCTATCAGTGGGTTACAGCAATTTAAAATCTTTGTTTTTGGCGTATTTGAATTATTAGCCTGG CAGAAGAAACAGCCACAACTGCCTAAAAAATAA
Upstream 100 bases:
>100_bases CATCGAGAAAAAATCGCCGGGCAGGTTGCCTATCGTTTATTTATTCGCCAACAAACCGATTTGCCAGCATGTGCATCGGT GGCAGAGCAGGAGCAACACC
Downstream 100 bases:
>100_bases TATCGTCACCCAATGCTATATACCCAAGTTACTTCAAGATGCAGGCAGGCAGCAACTGAGTAAACACCCAGGTGCTTAGA TAACTCAGTGACTGGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQPISGLQQFKIFVFGVFELLAW QKKQPQLPKK
Sequences:
>Translated_90_residues MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQPISGLQQFKIFVFGVFELLAW QKKQPQLPKK >Mature_90_residues MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQPISGLQQFKIFVFGVFELLAW QKKQPQLPKK
Specific function: Unknown
COG id: COG3776
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789876, Length=84, Percent_Identity=64.2857142857143, Blast_Score=109, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009525 [H]
Pfam domain/function: PF06611 DUF1145 [H]
EC number: NA
Molecular weight: Translated: 10701; Mature: 10701
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQP CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ISGLQQFKIFVFGVFELLAWQKKQPQLPKK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MWINLGRLLMLGVWFFILLNLFQPYPKPLRYFIHVAMIFMVLMHGLQLVLLKSTQPKDQP CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ISGLQQFKIFVFGVFELLAWQKKQPQLPKK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3025556; 8041620; 9278503 [H]