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The map label for this gene is 170026124

Identifier: 170026124

GI number: 170026124

Start: 4310610

End: 4310861

Strand: Reverse

Name: 170026124

Synonym: YPK_3911

Alternate gene names: NA

Gene position: 4310861-4310610 (Counterclockwise)

Preceding gene: 170026125

Following gene: 170026123

Centisome position: 91.93

GC content: 49.6

Gene sequence:

>252_bases
ATGAATATGAGTAGTGCTCAGGCCGTTGCTGGCTTGTTTCAGGCCACAGAGCCGCCAGTGGGTAACACACAGCAAGTGGC
AAAGTTTACCCAGTTAATGGCGCAGCCAGCGTCAACGGAATTAATGATGACACCAGAATCATTGCTGATGCAGCAGGCTG
AATGGATGCACGCTTCACTGGCGATAGATTTAACCGCCAAAGTGGCCGGTGTGATGGGGCAGAACATCAATAAATTGGTC
AACATGCAATGA

Upstream 100 bases:

>100_bases
TAAGGCGTGGTTCAGGGGCTGACAAAGTCAAATGACGGGAAACGTGCTGTTAGGGTAACCCTAAGACAGAATTAATTTTT
TATTAATAGGCGATGATCAG

Downstream 100 bases:

>100_bases
AATCTCTGCGGCAGATGTTAGCGATAGTCCTAATGACATTATCCCTTTCCGGTTGTGATATGGAGCTGTATAGCGGGCTG
TCTGAGGGGGAGGCCAATCA

Product: YscI/HrpB family type III secretion apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MNMSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAIDLTAKVAGVMGQNINKLV
NMQ

Sequences:

>Translated_83_residues
MNMSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAIDLTAKVAGVMGQNINKLV
NMQ
>Mature_83_residues
MNMSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAIDLTAKVAGVMGQNINKLV
NMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8923; Mature: 8923

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.8 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.8 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASL
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHH
AIDLTAKVAGVMGQNINKLVNMQ
HHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MNMSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASL
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHH
AIDLTAKVAGVMGQNINKLVNMQ
HHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA