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The map label for this gene is 170026125

Identifier: 170026125

GI number: 170026125

Start: 4310959

End: 4311207

Strand: Reverse

Name: 170026125

Synonym: YPK_3912

Alternate gene names: NA

Gene position: 4311207-4310959 (Counterclockwise)

Preceding gene: 170026126

Following gene: 170026124

Centisome position: 91.93

GC content: 55.42

Gene sequence:

>249_bases
ATGAGCTTACTTTCAGCGGATTGCCGTCAGTTGGTGGTCGAGGCCGCACTGGCGGGTGTCAATCACAGCTTGCTGGCCGA
AGCCCACGATATCGTCAATGCGTTGCCCTTATTAATACCAGATCCTCAGGTACGTTTGGTTTGTGAGGCGATGTTGCGGT
TCGGGCTGGGCGATAAGGTCCAGGCGCGGGCTTTGCTGGCGACATCGGGGGAAGAAGACGCACAGATTCTGCTGGGTTTA
CTGCAATAA

Upstream 100 bases:

>100_bases
CGTCGCAATTCACCATGAATCAGTATTCGGCTTTTCTCGATTTCAAAAGTATCGAGATGAAAATGATCAACGATATAAGA
AACAGAATCCTGTCCCGCAT

Downstream 100 bases:

>100_bases
GGCGTGGTTCAGGGGCTGACAAAGTCAAATGACGGGAAACGTGCTGTTAGGGTAACCCTAAGACAGAATTAATTTTTTAT
TAATAGGCGATGATCAGATG

Product: SsaH family type III secretion system protein

Products: NA

Alternate protein names: Type III Secretion Apparatus

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKVQARALLATSGEEDAQILLGL
LQ

Sequences:

>Translated_82_residues
MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKVQARALLATSGEEDAQILLGL
LQ
>Mature_81_residues
SLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKVQARALLATSGEEDAQILLGLL
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8700; Mature: 8569

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCH
QARALLATSGEEDAQILLGLLQ
HHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCH
QARALLATSGEEDAQILLGLLQ
HHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA