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The map label for this gene is ssaN [H]

Identifier: 170026119

GI number: 170026119

Start: 4305085

End: 4306422

Strand: Reverse

Name: ssaN [H]

Synonym: YPK_3906

Alternate gene names: 170026119

Gene position: 4306422-4305085 (Counterclockwise)

Preceding gene: 170026120

Following gene: 170026118

Centisome position: 91.83

GC content: 57.62

Gene sequence:

>1338_bases
ATGAAACTGCCTGATATCGCGCGGTTAACCCCCCGCCTGCAACAACAACTCACGCGACCGTCGGCACCACCGGAGGGCTT
GCGTTACCGTGGGCCGATTGTGGAGATTGGGCCGACCTTGTTACGAGCCAGCCTACCCAATGTGGCGCAGGGTGAATTAT
GCCGCATTGAACCGCAAGGGATGTTAGCTGAAGTGGTATCGATTGAGCAGGAAATGGCCTTGTTATCCCCCTTTGCCTCT
TCAGATGGCCTGCGTTGTGGGCAATGGGTGACGCCACTTGGACACATGCACCGGGTACAGGTGGGGGCTGATTTGGCCGG
GCGGATCTTGGATGGCCTAGGTGCTCCGATAGACGGCGGCCCCCCGCTGACGGGGCAGTGGCGTGAACTGGATTGCCCCC
CGCCTAGCCCATTAACCCGCCAGCCGGTAGAGCAAATGTTGACCACCGGGGGCCGCGCGATTGATGGGATATTGAGCTGT
GGCGAGGGCCAGCGTATTGGTATTTTTGCCGCCGCTGGCGTTGGGAAAAGTACTTTATTGAGCATGTTATGTGCTGATAG
TGCGGCCGATGTGATGGTGCTAGCACTGATTGGTGAGCGTGGGCGGGAGGTGCGCGAATTTCTTGAACAGGTGCTGACTC
CGGAGGCGCGTGCGCGCACCGTGGTGGTGGTGGCGACCTCTGACCGGCCAGCATTGGAGCGGTTGAAGGGGCTGTCTACT
GCCACCACGGTGGCGGAGTATTTTCGCGAACGTGGATTGAAGGTGTTGTTACTGGCGGATTCACTGACCCGCTATGCCCG
TGCCGCCCGTGAAATTGGTCTGGCGGCAGGTGAGCCACCGGCTGCTGGCAGTTTCCCCCCAAGTGTTTTTGCCAACTTAC
CCCGTCTGTTGGAGCGAACGGGTAACAGTGATCGCGGCAGCATTACGGCTTTTTATACCGTGCTGGTGGAGGGAGATGAC
ATGAATGAACCGGTAGCCGATGAAGTGCGTTCGCTGTTGGATGGGCACATCGTTTTATCACGACGGTTGGCCGGTGCTGG
GCATTATCCGGCGATTGATATTGCCGCCAGCGTCAGCCGTATCATGCCGCAAATCGTCAGTGCCGGGCAGTTGGCGATGG
CACAAAAACTACGGCGAATGCTGGCCTGTTATCAGGAGATCGAGCTGTTGGTGCAGATTGGTGAATATCAGGCAGGAGAA
GACCTACAGGCTGATGAAGCCTTACAACGCTATCCGGCAATATGCGCCTTTTTACAACAAGACCACAGCCTAACGCGTGA
CCCAGATACTGCTCATCTTGATACCACTCTGGAACACCTGGCGCAGGTTGTCGGTTGA

Upstream 100 bases:

>100_bases
CGGGATCTCTTCGTGCTACCGGTACTTTCCTGGCAGGAACTGGGCGATGAAATGAATCTCAAGGTGGCGGGCACCATTGA
ACTGATTGGCGATGAACTTG

Downstream 100 bases:

>100_bases
ATCACTCGCAACAGCGGACGCTACAACGGCTATTGGCGCTACGGCAGCGGCAGGAACGGCGGTTACGCCAGCAACTGGGA
CAACTGCGGCGTGAGCAGCA

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQGMLAEVVSIEQEMALLSPFAS
SDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGGRAIDGILSC
GEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLST
ATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGSITAFYTVLVEGDD
MNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGE
DLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLAQVVG

Sequences:

>Translated_445_residues
MKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQGMLAEVVSIEQEMALLSPFAS
SDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGGRAIDGILSC
GEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLST
ATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGSITAFYTVLVEGDD
MNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGE
DLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLAQVVG
>Mature_445_residues
MKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQGMLAEVVSIEQEMALLSPFAS
SDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGGRAIDGILSC
GEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLST
ATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGSITAFYTVLVEGDD
MNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGE
DLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLAQVVG

Specific function: Probable Catalytic Subunit Of A Protein Translocase For Flagellum-Specific Export, Or A Proton Translocase Involved In Local Circuits At The Flagellum. May Be Involved In A Specialized Protein Export Pathway That Proceeds Without Signal Peptide Cleavage.

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=325, Percent_Identity=31.0769230769231, Blast_Score=151, Evalue=9e-37,
Organism=Homo sapiens, GI50345984, Length=383, Percent_Identity=29.242819843342, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI4757810, Length=383, Percent_Identity=29.242819843342, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI19913428, Length=374, Percent_Identity=26.4705882352941, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI19913426, Length=377, Percent_Identity=26.2599469496021, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI19913424, Length=243, Percent_Identity=32.5102880658436, Blast_Score=112, Evalue=5e-25,
Organism=Escherichia coli, GI1788251, Length=386, Percent_Identity=48.1865284974093, Blast_Score=320, Evalue=8e-89,
Organism=Escherichia coli, GI1790170, Length=321, Percent_Identity=32.398753894081, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1790172, Length=389, Percent_Identity=29.8200514138817, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1790217, Length=247, Percent_Identity=28.3400809716599, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25144756, Length=325, Percent_Identity=29.5384615384615, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71988080, Length=386, Percent_Identity=27.720207253886, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71988063, Length=386, Percent_Identity=27.720207253886, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17510931, Length=421, Percent_Identity=26.1282660332542, Blast_Score=128, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17570191, Length=387, Percent_Identity=25.5813953488372, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17565854, Length=245, Percent_Identity=31.8367346938775, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71988074, Length=299, Percent_Identity=28.7625418060201, Blast_Score=107, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6322581, Length=324, Percent_Identity=30.8641975308642, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6319370, Length=415, Percent_Identity=28.433734939759, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6319603, Length=333, Percent_Identity=28.2282282282282, Blast_Score=133, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6320016, Length=227, Percent_Identity=30.8370044052863, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24638766, Length=325, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI28574560, Length=328, Percent_Identity=31.7073170731707, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI281361666, Length=370, Percent_Identity=26.4864864864865, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646341, Length=370, Percent_Identity=26.4864864864865, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17136796, Length=370, Percent_Identity=26.4864864864865, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24658560, Length=392, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24583992, Length=245, Percent_Identity=32.2448979591837, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583988, Length=245, Percent_Identity=32.2448979591837, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583986, Length=245, Percent_Identity=32.2448979591837, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583984, Length=245, Percent_Identity=32.2448979591837, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI20129479, Length=315, Percent_Identity=28.2539682539683, Blast_Score=113, Evalue=3e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005714
- InterPro:   IPR013380 [H]

Pfam domain/function: PF00006 ATP-synt_ab [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 47831; Mature: 47831

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQG
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCCCCCEEEECCCH
MLAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHCCCCCCCC
PPLTGQWRELDCPPPSPLTRQPVEQMLTTGGRAIDGILSCGEGQRIGIFAAAGVGKSTLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHH
SMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLST
HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHH
ATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERT
HHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GNSDRGSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSR
CCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHH
IMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
DHSLTRDPDTAHLDTTLEHLAQVVG
CCCCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQG
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCCCCCEEEECCCH
MLAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHCCCCCCCC
PPLTGQWRELDCPPPSPLTRQPVEQMLTTGGRAIDGILSCGEGQRIGIFAAAGVGKSTLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHH
SMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLST
HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHH
ATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERT
HHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GNSDRGSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSR
CCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHH
IMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
DHSLTRDPDTAHLDTTLEHLAQVVG
CCCCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]