| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yaiE [C]
Identifier: 170025498
GI number: 170025498
Start: 3592130
End: 3592417
Strand: Reverse
Name: yaiE [C]
Synonym: YPK_3281
Alternate gene names: 170025498
Gene position: 3592417-3592130 (Counterclockwise)
Preceding gene: 170025499
Following gene: 170025496
Centisome position: 76.61
GC content: 42.71
Gene sequence:
>288_bases ATGCTGAAATTTAATGAGTATTTTACCGGGAAAGTGAAATCTATTGGTTTTGACAGTGACAGCATTGGGCCAGCCAGCGT TGGGGTGATGGAAAAGGGAGAGTACACTTTTAGTACAGCTAAAGCGGAGGAAATGACAGTAATCACCGGTTCTTTGAAAG TACTTATACCGGGATCGCCTGACTGGCAAACCTTTATGCCGGGTGAAACCTTCTATATCCCAGGGGAAAGTGAATTTAAC CTACAAGTGGCTGAAGCATCTTCATATTTGTGCAAATACTTGAGCTAA
Upstream 100 bases:
>100_bases ATCTGGTTATGATCCCATTTCGTCATAATAATCAGTGACAGACCGTTTACAGAAATTCTAATATGAAAGCTCATTTATAT TAAGATGCGGGTGCAAAGCT
Downstream 100 bases:
>100_bases TGAATGTATTGAGTTAGCGAATCTGTCACCCTCTCTATGCCAGAGGGGGCGACATATCATCTATCCTTTTTACTTACTCT AAGCTGCATCGTAGCGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLKFNEYFTGKVKSIGFDSDSIGPASVGVMEKGEYTFSTAKAEEMTVITGSLKVLIPGSPDWQTFMPGETFYIPGESEFN LQVAEASSYLCKYLS
Sequences:
>Translated_95_residues MLKFNEYFTGKVKSIGFDSDSIGPASVGVMEKGEYTFSTAKAEEMTVITGSLKVLIPGSPDWQTFMPGETFYIPGESEFN LQVAEASSYLCKYLS >Mature_95_residues MLKFNEYFTGKVKSIGFDSDSIGPASVGVMEKGEYTFSTAKAEEMTVITGSLKVLIPGSPDWQTFMPGETFYIPGESEFN LQVAEASSYLCKYLS
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family
Homologues:
Organism=Escherichia coli, GI1786590, Length=94, Percent_Identity=67.0212765957447, Blast_Score=134, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2706_YERPA (Q1C4F4)
Other databases:
- EMBL: CP000308 - RefSeq: YP_652613.1 - ProteinModelPortal: Q1C4F4 - SMR: Q1C4F4 - STRING: Q1C4F4 - GeneID: 4120863 - GenomeReviews: CP000308_GR - KEGG: ypa:YPA_2706 - eggNOG: COG3123 - HOGENOM: HBG297920 - OMA: AVDTAYL - ProtClustDB: PRK10579 - BioCyc: YPES360102:YPA_2706-MONOMER - HAMAP: MF_01537 - InterPro: IPR009664 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10
Pfam domain/function: PF06865 DUF1255
EC number: NA
Molecular weight: Translated: 10427; Mature: 10427
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFNEYFTGKVKSIGFDSDSIGPASVGVMEKGEYTFSTAKAEEMTVITGSLKVLIPGSP CCCCCCCCCCEEEEECCCCCCCCCCEECEEECCCEEEECCCCCEEEEEECCEEEEECCCC DWQTFMPGETFYIPGESEFNLQVAEASSYLCKYLS CCCEECCCCEEEECCCCCEEEEEECCHHHHHHHCC >Mature Secondary Structure MLKFNEYFTGKVKSIGFDSDSIGPASVGVMEKGEYTFSTAKAEEMTVITGSLKVLIPGSP CCCCCCCCCCEEEEECCCCCCCCCCEECEEECCCEEEECCCCCEEEEEECCEEEEECCCC DWQTFMPGETFYIPGESEFNLQVAEASSYLCKYLS CCCEECCCCEEEECCCCCEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA