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The map label for this gene is ybaY [H]

Identifier: 170025433

GI number: 170025433

Start: 3516493

End: 3517014

Strand: Reverse

Name: ybaY [H]

Synonym: YPK_3216

Alternate gene names: 170025433

Gene position: 3517014-3516493 (Counterclockwise)

Preceding gene: 170025435

Following gene: 170025423

Centisome position: 75.0

GC content: 53.83

Gene sequence:

>522_bases
ATGAAACCTTGGCAGCCAAAGGCATTATGGCAAATAGTGGGTGGCGCGGCATTAGCAGTAAGCCTGACAGGGTGTGCTCA
TCAAAGCGCGGAGGCTCCCGTTGCAGCACCTATAAGTACAGCGACGGTTGCGGCATCGGTCGCACAATCAACGGTCCATG
GGACTGTGAATATTCGTGAACGCGTTGCATTACCGCCTGATGCGGTGGTAACCGTCACGCTGTCGGATATCTCACTGGCT
GATGCTCCATCGCGAGTTATCGCGCAGAAGGCGGTACGTACTGAAGGTAAACAAGCACCGTTTACTTACTCTTTACCGTT
TAATCCGTCGGATATCCAGCCAAATGCACGCGTCATTGTCAGTGCCGCGATCACCCGCAATGGGCAATTACTGTTTATCA
CTGATACCATCCAGGAAGTCATAAACCGTGGCGCGGGTACTCAGGCCGATCTATTGCTGGTCCCTGTACCTTCGGTGGCG
CTTGAAATCGCTCCAGCGCCTGCCGCTGCCACGATACAGTAA

Upstream 100 bases:

>100_bases
CTTTATGCTATAATTAGCACGCTAGGTGGTTGAAGCCACTTATTAACGCAGGCTTTTCTGTGAATAGCCAGCATCTTAAT
AATAACAAGGAGAGAGGCCT

Downstream 100 bases:

>100_bases
ACAGCCTTATACCCTTCTTATTTGACGTTGCCGCGGATCCCGCTCTAATAACTGGCGTGGGTCAGTTCATTGGAGCCCGC
GGGTTGTGCTGTATGCAACG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKPWQPKALWQIVGGAALAVSLTGCAHQSAEAPVAAPISTATVAASVAQSTVHGTVNIRERVALPPDAVVTVTLSDISLA
DAPSRVIAQKAVRTEGKQAPFTYSLPFNPSDIQPNARVIVSAAITRNGQLLFITDTIQEVINRGAGTQADLLLVPVPSVA
LEIAPAPAAATIQ

Sequences:

>Translated_173_residues
MKPWQPKALWQIVGGAALAVSLTGCAHQSAEAPVAAPISTATVAASVAQSTVHGTVNIRERVALPPDAVVTVTLSDISLA
DAPSRVIAQKAVRTEGKQAPFTYSLPFNPSDIQPNARVIVSAAITRNGQLLFITDTIQEVINRGAGTQADLLLVPVPSVA
LEIAPAPAAATIQ
>Mature_173_residues
MKPWQPKALWQIVGGAALAVSLTGCAHQSAEAPVAAPISTATVAASVAQSTVHGTVNIRERVALPPDAVVTVTLSDISLA
DAPSRVIAQKAVRTEGKQAPFTYSLPFNPSDIQPNARVIVSAAITRNGQLLFITDTIQEVINRGAGTQADLLLVPVPSVA
LEIAPAPAAATIQ

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=132, Percent_Identity=63.6363636363636, Blast_Score=161, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17829; Mature: 17829

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPWQPKALWQIVGGAALAVSLTGCAHQSAEAPVAAPISTATVAASVAQSTVHGTVNIRE
CCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEE
RVALPPDAVVTVTLSDISLADAPSRVIAQKAVRTEGKQAPFTYSLPFNPSDIQPNARVIV
EECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEE
SAAITRNGQLLFITDTIQEVINRGAGTQADLLLVPVPSVALEIAPAPAAATIQ
EEEEECCCCEEEEEHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCEECC
>Mature Secondary Structure
MKPWQPKALWQIVGGAALAVSLTGCAHQSAEAPVAAPISTATVAASVAQSTVHGTVNIRE
CCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEE
RVALPPDAVVTVTLSDISLADAPSRVIAQKAVRTEGKQAPFTYSLPFNPSDIQPNARVIV
EECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEE
SAAITRNGQLLFITDTIQEVINRGAGTQADLLLVPVPSVALEIAPAPAAATIQ
EEEEECCCCEEEEEHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]