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The map label for this gene is wcaE [C]

Identifier: 170025397

GI number: 170025397

Start: 3476926

End: 3477675

Strand: Reverse

Name: wcaE [C]

Synonym: YPK_3180

Alternate gene names: 170025397

Gene position: 3477675-3476926 (Counterclockwise)

Preceding gene: 170025398

Following gene: 170025396

Centisome position: 74.16

GC content: 31.47

Gene sequence:

>750_bases
ATGAAAATATCCATAATTACTGCTACATATAATAGTGCGTCAACTATTGTAGAAACATTAGATTCTTTGAATGAACAAAC
ATATGATAATATAGAACATATTATCATTGATGGTGGCTCCACAGATAACACGCTTGAACTTGTAAAAGCGTATGGGAAAC
GTGTTTCAATTGTGATATCAGAAAAAGATGAAGGAATTTATGATGCATTAAATAAAGGTATTTCCGTTGCTACTGGTGAT
ATTATTGGTATTTTACATTCAGATGATATGTTTGCTTATATCGATGCAGTAAGTGATATTGCAAAAGTATTTTTCGATAA
TACTGTGGATGCTTGCTATGGTGATTTATCATATATATCGAGATCTGGAGATAATCGAGTCGTAAGAACTTGGATCGCAG
GTGACTACTCAGAAAGTAAATATAAATATGGTTGGATGCCGCCACATACAACCTTTTATATGAAAAATGCACTATACAAA
AAACTAGGTGGATATGATACTACACTTAAAATAGCAGCAGATTATGATGCCATGCTACGTTATACTTTGGTAGCAAAAAT
CAATATTGTGTATATACCTAAGATTTTAATTTATATGAAGGTTGGAGGGGTGAGTACACGGTTATCACAGAAATTTGAGT
CATTAAAAGATGAGTTAATTGTAATGAAACGCTATAATTTAGGTGGAGTTATGACCTTTATGAAAAAGAAAATTTACAAA
CTCCCTCAGTTTTTTAAAATTGTCAAATAG

Upstream 100 bases:

>100_bases
CTTGAAATTATAGAGGTTCAGTCGGGTTCTTATTTAGGTGAAGATGATATTATCCGTTTAGAATAACGGATTTATCTTAA
ATTTTTTATTTAGGTAAAGA

Downstream 100 bases:

>100_bases
ATGTAAATTAATATAGTGTGAATAATATTGAAATATCAATAATAATCTATGGTTAAATAATTTTAATTGGATTTTTTAGT
TATGTTATTATGCAGTGCCA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKISIITATYNSASTIVETLDSLNEQTYDNIEHIIIDGGSTDNTLELVKAYGKRVSIVISEKDEGIYDALNKGISVATGD
IIGILHSDDMFAYIDAVSDIAKVFFDNTVDACYGDLSYISRSGDNRVVRTWIAGDYSESKYKYGWMPPHTTFYMKNALYK
KLGGYDTTLKIAADYDAMLRYTLVAKINIVYIPKILIYMKVGGVSTRLSQKFESLKDELIVMKRYNLGGVMTFMKKKIYK
LPQFFKIVK

Sequences:

>Translated_249_residues
MKISIITATYNSASTIVETLDSLNEQTYDNIEHIIIDGGSTDNTLELVKAYGKRVSIVISEKDEGIYDALNKGISVATGD
IIGILHSDDMFAYIDAVSDIAKVFFDNTVDACYGDLSYISRSGDNRVVRTWIAGDYSESKYKYGWMPPHTTFYMKNALYK
KLGGYDTTLKIAADYDAMLRYTLVAKINIVYIPKILIYMKVGGVSTRLSQKFESLKDELIVMKRYNLGGVMTFMKKKIYK
LPQFFKIVK
>Mature_249_residues
MKISIITATYNSASTIVETLDSLNEQTYDNIEHIIIDGGSTDNTLELVKAYGKRVSIVISEKDEGIYDALNKGISVATGD
IIGILHSDDMFAYIDAVSDIAKVFFDNTVDACYGDLSYISRSGDNRVVRTWIAGDYSESKYKYGWMPPHTTFYMKNALYK
KLGGYDTTLKIAADYDAMLRYTLVAKINIVYIPKILIYMKVGGVSTRLSQKFESLKDELIVMKRYNLGGVMTFMKKKIYK
LPQFFKIVK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788368, Length=222, Percent_Identity=31.0810810810811, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 28124; Mature: 28124

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIITATYNSASTIVETLDSLNEQTYDNIEHIIIDGGSTDNTLELVKAYGKRVSIVIS
CEEEEEEEECCCHHHHHHHHHHHCHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEE
EKDEGIYDALNKGISVATGDIIGILHSDDMFAYIDAVSDIAKVFFDNTVDACYGDLSYIS
CCCCCHHHHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RSGDNRVVRTWIAGDYSESKYKYGWMPPHTTFYMKNALYKKLGGYDTTLKIAADYDAMLR
CCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH
YTLVAKINIVYIPKILIYMKVGGVSTRLSQKFESLKDELIVMKRYNLGGVMTFMKKKIYK
HHHHHEEEEEEECEEEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
LPQFFKIVK
CHHHHHHCC
>Mature Secondary Structure
MKISIITATYNSASTIVETLDSLNEQTYDNIEHIIIDGGSTDNTLELVKAYGKRVSIVIS
CEEEEEEEECCCHHHHHHHHHHHCHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEE
EKDEGIYDALNKGISVATGDIIGILHSDDMFAYIDAVSDIAKVFFDNTVDACYGDLSYIS
CCCCCHHHHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RSGDNRVVRTWIAGDYSESKYKYGWMPPHTTFYMKNALYKKLGGYDTTLKIAADYDAMLR
CCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH
YTLVAKINIVYIPKILIYMKVGGVSTRLSQKFESLKDELIVMKRYNLGGVMTFMKKKIYK
HHHHHEEEEEEECEEEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
LPQFFKIVK
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]