| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is manC [H]
Identifier: 170025398
GI number: 170025398
Start: 3477710
End: 3479098
Strand: Reverse
Name: manC [H]
Synonym: YPK_3181
Alternate gene names: 170025398
Gene position: 3479098-3477710 (Counterclockwise)
Preceding gene: 170025399
Following gene: 170025397
Centisome position: 74.19
GC content: 42.48
Gene sequence:
>1389_bases ATGCTATTACCTGTAATTATGGCTGGAGGTGCTGGTAGCCGTTTGTGGCCATTATCCCGAGCTCTTTATCCTAAACAATT TCTAGCGCTAACGTCAGATTTGACGATGCTACAAGAAACCCTATTGCGTCTGGACGGCCTTCCCCACCTTGCACCATTAG TGATTTGTAACGAAGAACATCGCTTTATTATCGCAGAACAGTTACGTCAGAAAAATCTGGTGCATAGCGGAATAGTCTTG GAACCTGTTGGGCGCAATACCGCGCCAGCTATAGCATTGGCTGCCTTACGAGCAACAATGAGTGGGGATGATCCTCTACT ATTGGTATTAGCAGCCGATCACGTGATTCAGGATAAACTTGCATTTATTCGTGCCGTCCAACGTGCTGAACCGCTTGCTG AAGCGGGAAAATTGGTTACTTTTGGAATCGTGCCAAAGAGTCCGGAAACAGGATATGGATATATTCGCCAAGGGAAGCAA GTCGTAGATGGCGCTTATCAGGTTGCTGCTTTTGTTGAGAAGCCAGATCTGATTACTGCAGAGCGGTATTTGGCTTCGGG TGACTATTATTGGAATAGCGGTATGTTTGCATTTAAAGCATCTCGCTATCTACAGGAATTAGCTCTACATCGCCCGGATA TTTTGGCTGCCTGCAAGCAAGCCATTGCTGGTCAACATACTGATTTAGATTTTATTCGTCTCAATGAAGAAGCTTTCTCT AGTTGCCCTAGTGAATCTATCGACTATGCTGTGATGGAAAAAACTAGCGATGCCGTTGTAGTGCCACTGGATGCACAGTG GAATGATGTTGGGTGCTGGTCAGCGCTTTGGGAAATTAATACTAAAGATGACCATGGAAATGTTATTCGTGGTGATGTAT TAATGGAAGATACTAATAATAGCTACGTTTATTCTCAAAATAGGCTCATTGCAACTGTAGGCATTAATGATTTGGTTATT GTTGAAACTAAAGATGCCATTTTGGTTGCTCATAAAGATAAAGTACAAAATGTTAAAGGGATAGTTGGACAACTTAAGCT TGAATCTCGATGTGAATATCTACAGCACCGGGAAGTCTATCGCCCTTGGGGTTCGCATGATGCTATTGCTGAAGGTATTC GCTACCATGTGCAGCATGTAACAGTGAAACCGGGTCAGCGCATTACGACTCAAATTCATTATCACAGAGCAGAACATTGG ATTGTAGTTTCTGGTACGGCCTTGGTAACTATTGCAGATAAGACAATTATATTATGTGAGAATGAGTCAACATTTATCCC TATTGGCAAACCTCACTCTTTAGAGAATCCCGGTTCTATTCCGCTTGAAATTATAGAGGTTCAGTCGGGTTCTTATTTAG GTGAAGATGATATTATCCGTTTAGAATAA
Upstream 100 bases:
>100_bases TAAGTAAAAAATATTATCGGGTTTCTATTTACTATTCGTTATCTGATGATTATATTTATTTGCATATCATCTCTATTTTA AAAATAGGAAATAATTGCTC
Downstream 100 bases:
>100_bases CGGATTTATCTTAAATTTTTTATTTAGGTAAAGAATGAAAATATCCATAATTACTGCTACATATAATAGTGCGTCAACTA TTGTAGAAACATTAGATTCT
Product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Products: NA
Alternate protein names: GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MLLPVIMAGGAGSRLWPLSRALYPKQFLALTSDLTMLQETLLRLDGLPHLAPLVICNEEHRFIIAEQLRQKNLVHSGIVL EPVGRNTAPAIALAALRATMSGDDPLLLVLAADHVIQDKLAFIRAVQRAEPLAEAGKLVTFGIVPKSPETGYGYIRQGKQ VVDGAYQVAAFVEKPDLITAERYLASGDYYWNSGMFAFKASRYLQELALHRPDILAACKQAIAGQHTDLDFIRLNEEAFS SCPSESIDYAVMEKTSDAVVVPLDAQWNDVGCWSALWEINTKDDHGNVIRGDVLMEDTNNSYVYSQNRLIATVGINDLVI VETKDAILVAHKDKVQNVKGIVGQLKLESRCEYLQHREVYRPWGSHDAIAEGIRYHVQHVTVKPGQRITTQIHYHRAEHW IVVSGTALVTIADKTIILCENESTFIPIGKPHSLENPGSIPLEIIEVQSGSYLGEDDIIRLE
Sequences:
>Translated_462_residues MLLPVIMAGGAGSRLWPLSRALYPKQFLALTSDLTMLQETLLRLDGLPHLAPLVICNEEHRFIIAEQLRQKNLVHSGIVL EPVGRNTAPAIALAALRATMSGDDPLLLVLAADHVIQDKLAFIRAVQRAEPLAEAGKLVTFGIVPKSPETGYGYIRQGKQ VVDGAYQVAAFVEKPDLITAERYLASGDYYWNSGMFAFKASRYLQELALHRPDILAACKQAIAGQHTDLDFIRLNEEAFS SCPSESIDYAVMEKTSDAVVVPLDAQWNDVGCWSALWEINTKDDHGNVIRGDVLMEDTNNSYVYSQNRLIATVGINDLVI VETKDAILVAHKDKVQNVKGIVGQLKLESRCEYLQHREVYRPWGSHDAIAEGIRYHVQHVTVKPGQRITTQIHYHRAEHW IVVSGTALVTIADKTIILCENESTFIPIGKPHSLENPGSIPLEIIEVQSGSYLGEDDIIRLE >Mature_462_residues MLLPVIMAGGAGSRLWPLSRALYPKQFLALTSDLTMLQETLLRLDGLPHLAPLVICNEEHRFIIAEQLRQKNLVHSGIVL EPVGRNTAPAIALAALRATMSGDDPLLLVLAADHVIQDKLAFIRAVQRAEPLAEAGKLVTFGIVPKSPETGYGYIRQGKQ VVDGAYQVAAFVEKPDLITAERYLASGDYYWNSGMFAFKASRYLQELALHRPDILAACKQAIAGQHTDLDFIRLNEEAFS SCPSESIDYAVMEKTSDAVVVPLDAQWNDVGCWSALWEINTKDDHGNVIRGDVLMEDTNNSYVYSQNRLIATVGINDLVI VETKDAILVAHKDKVQNVKGIVGQLKLESRCEYLQHREVYRPWGSHDAIAEGIRYHVQHVTVKPGQRITTQIHYHRAEHW IVVSGTALVTIADKTIILCENESTFIPIGKPHSLENPGSIPLEIIEVQSGSYLGEDDIIRLE
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O9 antigen [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=467, Percent_Identity=61.8843683083512, Blast_Score=581, Evalue=1e-167,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 51238; Mature: 51238
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPVIMAGGAGSRLWPLSRALYPKQFLALTSDLTMLQETLLRLDGLPHLAPLVICNEEH CCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC RFIIAEQLRQKNLVHSGIVLEPVGRNTAPAIALAALRATMSGDDPLLLVLAADHVIQDKL CEEEHHHHHHHCHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH AFIRAVQRAEPLAEAGKLVTFGIVPKSPETGYGYIRQGKQVVDGAYQVAAFVEKPDLITA HHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEH ERYLASGDYYWNSGMFAFKASRYLQELALHRPDILAACKQAIAGQHTDLDFIRLNEEAFS HHHHCCCCEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECHHHHH SCPSESIDYAVMEKTSDAVVVPLDAQWNDVGCWSALWEINTKDDHGNVIRGDVLMEDTNN CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEECCEEEEECCC SYVYSQNRLIATVGINDLVIVETKDAILVAHKDKVQNVKGIVGQLKLESRCEYLQHREVY CEEEECCCEEEEECCCEEEEEEECCEEEEEECHHHHHHHHHHHHEEHHHHHHHHHHHHHH RPWGSHDAIAEGIRYHVQHVTVKPGQRITTQIHYHRAEHWIVVSGTALVTIADKTIILCE CCCCCHHHHHHHHHEEEEEEEECCCCEEEEEEEEEECCEEEEEECCEEEEEECCEEEEEC NESTFIPIGKPHSLENPGSIPLEIIEVQSGSYLGEDDIIRLE CCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEC >Mature Secondary Structure MLLPVIMAGGAGSRLWPLSRALYPKQFLALTSDLTMLQETLLRLDGLPHLAPLVICNEEH CCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC RFIIAEQLRQKNLVHSGIVLEPVGRNTAPAIALAALRATMSGDDPLLLVLAADHVIQDKL CEEEHHHHHHHCHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH AFIRAVQRAEPLAEAGKLVTFGIVPKSPETGYGYIRQGKQVVDGAYQVAAFVEKPDLITA HHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEH ERYLASGDYYWNSGMFAFKASRYLQELALHRPDILAACKQAIAGQHTDLDFIRLNEEAFS HHHHCCCCEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECHHHHH SCPSESIDYAVMEKTSDAVVVPLDAQWNDVGCWSALWEINTKDDHGNVIRGDVLMEDTNN CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEECCEEEEECCC SYVYSQNRLIATVGINDLVIVETKDAILVAHKDKVQNVKGIVGQLKLESRCEYLQHREVY CEEEECCCEEEEECCCEEEEEEECCEEEEEECHHHHHHHHHHHHEEHHHHHHHHHHHHHH RPWGSHDAIAEGIRYHVQHVTVKPGQRITTQIHYHRAEHWIVVSGTALVTIADKTIILCE CCCCCHHHHHHHHHEEEEEEEECCCCEEEEEEEEEECCEEEEEECCEEEEEECCEEEEEC NESTFIPIGKPHSLENPGSIPLEIIEVQSGSYLGEDDIIRLE CCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7515042; 9004408 [H]