| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025334
Identifier: 170025334
GI number: 170025334
Start: 3411494
End: 3412087
Strand: Reverse
Name: 170025334
Synonym: YPK_3115
Alternate gene names: NA
Gene position: 3412087-3411494 (Counterclockwise)
Preceding gene: 170025335
Following gene: 170025333
Centisome position: 72.76
GC content: 50.67
Gene sequence:
>594_bases ATGAGTGAATCAGGGCAGCTAGCCAAGTTATACCGGCAAATAAAAATGATGATCGGGGTGGGGCGGGTGACCGGCAGTCA TGATGGTGGTTCAGTTCAAACCGTTCAATACCAAACCCCGCTGGAAGTCCGTAGTGATACGCCGAGATTGGCTGAATTTG GTTTTTCGTCCGGGTTACCCACCGGTACCGATGTGGTGATTGGCTTTCTGGGCGGCGACCGGTCAAGCGCGGTCATCATT GGTTCCAATCATCAGTCATTTCGTCATGTTGGGCTAAATTCGGGTGAGACGGTGATTTATTCGCAGTGGGGGCAATACAT CAAGTTAACGGAAGCTGGCATTATTATTGAGGCCAATAGTCAGCCGGTCACAGTCAATAATGCGACTGAGGTGACGGTTA ATGCCACGGTAAAAGTACGGCTAAATACCCCGTTACTGGAGGTCAGCGGCGATATTGTCGATAACGCTGGCAGCAATGGC ACCACACTGAAAACCCTACGCGAAGCCTATAACACCCACAATCACCAACTGAAAAATGTGCAGGGCGGTAGCTCGACATT AACCAGTGAAGCGACGGGCAAGGTGGTTCAATGA
Upstream 100 bases:
>100_bases ACGACCAGGGTACCGCCGCGCAAATGGTGCTGATGCCGCCTGAAGCCTTCACCGTCCAACCTTATCAGTTTTATTCCAAT CTTATGGAGGTGAATCAGTG
Downstream 100 bases:
>100_bases CAACCGATATCAAAACAATCTGGGAGCCGGGCAAATTGCTGGGCGACTGGCAGACCGGCGGCGGTGGGCTACTGGATGGC AATGATTTAGAGACTGCTAT
Product: Mu Gp45 domain-containing protein
Products: NA
Alternate protein names: Bacteriophage Mu; Bacteriophage Protein; Baseplate Assembly Protein; Baseplate Assembly Mu-Like; Phage Baseplate Assembly Protein; Baseplate Assembly Phage Protein
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSESGQLAKLYRQIKMMIGVGRVTGSHDGGSVQTVQYQTPLEVRSDTPRLAEFGFSSGLPTGTDVVIGFLGGDRSSAVII GSNHQSFRHVGLNSGETVIYSQWGQYIKLTEAGIIIEANSQPVTVNNATEVTVNATVKVRLNTPLLEVSGDIVDNAGSNG TTLKTLREAYNTHNHQLKNVQGGSSTLTSEATGKVVQ
Sequences:
>Translated_197_residues MSESGQLAKLYRQIKMMIGVGRVTGSHDGGSVQTVQYQTPLEVRSDTPRLAEFGFSSGLPTGTDVVIGFLGGDRSSAVII GSNHQSFRHVGLNSGETVIYSQWGQYIKLTEAGIIIEANSQPVTVNNATEVTVNATVKVRLNTPLLEVSGDIVDNAGSNG TTLKTLREAYNTHNHQLKNVQGGSSTLTSEATGKVVQ >Mature_196_residues SESGQLAKLYRQIKMMIGVGRVTGSHDGGSVQTVQYQTPLEVRSDTPRLAEFGFSSGLPTGTDVVIGFLGGDRSSAVIIG SNHQSFRHVGLNSGETVIYSQWGQYIKLTEAGIIIEANSQPVTVNNATEVTVNATVKVRLNTPLLEVSGDIVDNAGSNGT TLKTLREAYNTHNHQLKNVQGGSSTLTSEATGKVVQ
Specific function: Unknown
COG id: COG4384
COG function: function code S; Mu-like prophage protein gp45
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20933; Mature: 20801
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESGQLAKLYRQIKMMIGVGRVTGSHDGGSVQTVQYQTPLEVRSDTPRLAEFGFSSGLP CCCCHHHHHHHHHHHHHHEECEEECCCCCCCEEEEEEECCCEECCCCCHHHHCCCCCCCC TGTDVVIGFLGGDRSSAVIIGSNHQSFRHVGLNSGETVIYSQWGQYIKLTEAGIIIEANS CCCEEEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECEEEEECCC QPVTVNNATEVTVNATVKVRLNTPLLEVSGDIVDNAGSNGTTLKTLREAYNTHNHQLKNV CCEEECCCEEEEEEEEEEEEECCCEEEECCCEEECCCCCCCHHHHHHHHHCCCCCEEEEC QGGSSTLTSEATGKVVQ CCCCCEECCCCCCCCCC >Mature Secondary Structure SESGQLAKLYRQIKMMIGVGRVTGSHDGGSVQTVQYQTPLEVRSDTPRLAEFGFSSGLP CCCHHHHHHHHHHHHHHEECEEECCCCCCCEEEEEEECCCEECCCCCHHHHCCCCCCCC TGTDVVIGFLGGDRSSAVIIGSNHQSFRHVGLNSGETVIYSQWGQYIKLTEAGIIIEANS CCCEEEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECEEEEECCC QPVTVNNATEVTVNATVKVRLNTPLLEVSGDIVDNAGSNGTTLKTLREAYNTHNHQLKNV CCEEECCCEEEEEEEEEEEEECCCEEEECCCEEECCCCCCCHHHHHHHHHCCCCCEEEEC QGGSSTLTSEATGKVVQ CCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA