| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025335
Identifier: 170025335
GI number: 170025335
Start: 3412087
End: 3413157
Strand: Reverse
Name: 170025335
Synonym: YPK_3116
Alternate gene names: NA
Gene position: 3413157-3412087 (Counterclockwise)
Preceding gene: 170025336
Following gene: 170025334
Centisome position: 72.78
GC content: 52.1
Gene sequence:
>1071_bases ATGAGTGATGATTTGACACTGCGTATTGGCAATAAGCTGATCACGGGCTGGGATAATATCCGCGTCACTCGCAGCATAGA GCGACTACCCAGCGATTTCAGCTTGTCATTGATGGACCTTTATCCGGGTAGTGATAACCAGCAGTGGGTTAACCCCGGCG ACCCCTGTGTGGTTAATTTGGGTGATGATGTCGTGCTGACTGGATACATAGACCGCTGGGCACCGATGATCAGTGGCTCT CGCCGCGAAGTCAGGGCTACGGGGCGGAGCAAGTGCCAGGACTTAGTTGATTGCTCTGCCGAGTGGCCAAATAATGTGAT CAGCCAATCTACCGCACTACAGATAGCACAGCGGTTGGCGCACCCCTACGGTATTACGGTATCTACCGATGTTATCGATC TTGATATTGTCCCCCAATTTACGCTGAACTGGGGAGAGTCCTCTCAGGAAATCATTGACCGCATCACCCGCTGGGCGGCA TTACTGTATTACGATCAACCGGATGGCAACTTATATCTGACTCGAGTGGGTACGCGTAAAGCGGCCAGCGGGGTCGCGCA GGGCATCAATATAGAAGATGCCGCGTATAACTCCGGTATGGATCAGCGCTTCTCTGACTACATCGGTGTATCGATGTCGG TGAGCCAACTTCAGGAGCAGGTACAGGACGCCGGATATGGCGCGGTGACGTTAGCCAGAAGTCGCGATCCTGAAGCGGCC AAAATGCGTTATCGCAACCGTATTATCATTGTTGAAAGCACCATGAAAGCGCTAAAACTGGCCCAGCAGTGCATCGACTG GGAAATGAACCGCCGCTATGGGCGCTCTAAAGAGCTGTTGGTGACAGTCGATAGCTGGCGCGATAAAGACGGGAAGTTAT GGGAACCCAACACCCTGATCCCGATTGATTTGCCTATCTTTGGCTTAAAGGATGAACTCTGGTTGTTATCGGAGGTGACG TATCTCAAAGACGACCAGGGTACCGCCGCGCAAATGGTGCTGATGCCGCCTGAAGCCTTCACCGTCCAACCTTATCAGTT TTATTCCAATCTTATGGAGGTGAATCAGTGA
Upstream 100 bases:
>100_bases ACCGGCTCTATCAGGATGCGCGACGGGGTGATGCGCTGGTGAAAATGGCGGTTCCCGTTCATCCGGCATTTATGCCCCTT CGATTTAAGGCGCTGAACTC
Downstream 100 bases:
>100_bases TGAGTGAATCAGGGCAGCTAGCCAAGTTATACCGGCAAATAAAAATGATGATCGGGGTGGGGCGGGTGACCGGCAGTCAT GATGGTGGTTCAGTTCAAAC
Product: Mu P family protein
Products: NA
Alternate protein names: Bacteriophage Mu P Protein; Mu P Family Protein; Bacteriophage Mu P; Bacteriophage Tail Protein; Phage Tail Protein; Mu-Like Prophage Tail Protein; Mu-Like Prophage Tail Protein GpP; Bacteriophage Related Protein; Bacteriophage Mu P Family Protein; Prophage; Mu-Like Phage Tail Protein GpP; Bacteriophage V Tail Protein; Mu-Like Phage P Protein; Bacteriophage Tail Protein GpP Mu-Like; Phage Baseplate Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSDDLTLRIGNKLITGWDNIRVTRSIERLPSDFSLSLMDLYPGSDNQQWVNPGDPCVVNLGDDVVLTGYIDRWAPMISGS RREVRATGRSKCQDLVDCSAEWPNNVISQSTALQIAQRLAHPYGITVSTDVIDLDIVPQFTLNWGESSQEIIDRITRWAA LLYYDQPDGNLYLTRVGTRKAASGVAQGINIEDAAYNSGMDQRFSDYIGVSMSVSQLQEQVQDAGYGAVTLARSRDPEAA KMRYRNRIIIVESTMKALKLAQQCIDWEMNRRYGRSKELLVTVDSWRDKDGKLWEPNTLIPIDLPIFGLKDELWLLSEVT YLKDDQGTAAQMVLMPPEAFTVQPYQFYSNLMEVNQ
Sequences:
>Translated_356_residues MSDDLTLRIGNKLITGWDNIRVTRSIERLPSDFSLSLMDLYPGSDNQQWVNPGDPCVVNLGDDVVLTGYIDRWAPMISGS RREVRATGRSKCQDLVDCSAEWPNNVISQSTALQIAQRLAHPYGITVSTDVIDLDIVPQFTLNWGESSQEIIDRITRWAA LLYYDQPDGNLYLTRVGTRKAASGVAQGINIEDAAYNSGMDQRFSDYIGVSMSVSQLQEQVQDAGYGAVTLARSRDPEAA KMRYRNRIIIVESTMKALKLAQQCIDWEMNRRYGRSKELLVTVDSWRDKDGKLWEPNTLIPIDLPIFGLKDELWLLSEVT YLKDDQGTAAQMVLMPPEAFTVQPYQFYSNLMEVNQ >Mature_355_residues SDDLTLRIGNKLITGWDNIRVTRSIERLPSDFSLSLMDLYPGSDNQQWVNPGDPCVVNLGDDVVLTGYIDRWAPMISGSR REVRATGRSKCQDLVDCSAEWPNNVISQSTALQIAQRLAHPYGITVSTDVIDLDIVPQFTLNWGESSQEIIDRITRWAAL LYYDQPDGNLYLTRVGTRKAASGVAQGINIEDAAYNSGMDQRFSDYIGVSMSVSQLQEQVQDAGYGAVTLARSRDPEAAK MRYRNRIIIVESTMKALKLAQQCIDWEMNRRYGRSKELLVTVDSWRDKDGKLWEPNTLIPIDLPIFGLKDELWLLSEVTY LKDDQGTAAQMVLMPPEAFTVQPYQFYSNLMEVNQ
Specific function: Unknown
COG id: COG4379
COG function: function code R; Mu-like prophage tail protein gpP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40235; Mature: 40104
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDLTLRIGNKLITGWDNIRVTRSIERLPSDFSLSLMDLYPGSDNQQWVNPGDPCVVNL CCCCEEEEECCEEEECCCCEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC GDDVVLTGYIDRWAPMISGSRREVRATGRSKCQDLVDCSAEWPNNVISQSTALQIAQRLA CCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC HPYGITVSTDVIDLDIVPQFTLNWGESSQEIIDRITRWAALLYYDQPDGNLYLTRVGTRK CCCCCEEECCEEEEEECCCEEECCCCCHHHHHHHHHHHEEEEEEECCCCCEEEEECCCHH AASGVAQGINIEDAAYNSGMDQRFSDYIGVSMSVSQLQEQVQDAGYGAVTLARSRDPEAA HHHHHHCCCCCCHHHCCCCCHHHHHHHHCCEEEHHHHHHHHHHCCCCEEEEECCCCCHHH KMRYRNRIIIVESTMKALKLAQQCIDWEMNRRYGRSKELLVTVDSWRDKDGKLWEPNTLI HHHHCCEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEEECCCCCCCCEECCCEEE PIDLPIFGLKDELWLLSEVTYLKDDQGTAAQMVLMPPEAFTVQPYQFYSNLMEVNQ EECCCEECCCCCHHHHHHHHEEECCCCCEEEEEEECCCCCEECHHHHHHHHHHCCC >Mature Secondary Structure SDDLTLRIGNKLITGWDNIRVTRSIERLPSDFSLSLMDLYPGSDNQQWVNPGDPCVVNL CCCEEEEECCEEEECCCCEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC GDDVVLTGYIDRWAPMISGSRREVRATGRSKCQDLVDCSAEWPNNVISQSTALQIAQRLA CCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC HPYGITVSTDVIDLDIVPQFTLNWGESSQEIIDRITRWAALLYYDQPDGNLYLTRVGTRK CCCCCEEECCEEEEEECCCEEECCCCCHHHHHHHHHHHEEEEEEECCCCCEEEEECCCHH AASGVAQGINIEDAAYNSGMDQRFSDYIGVSMSVSQLQEQVQDAGYGAVTLARSRDPEAA HHHHHHCCCCCCHHHCCCCCHHHHHHHHCCEEEHHHHHHHHHHCCCCEEEEECCCCCHHH KMRYRNRIIIVESTMKALKLAQQCIDWEMNRRYGRSKELLVTVDSWRDKDGKLWEPNTLI HHHHCCEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEEECCCCCCCCEECCCEEE PIDLPIFGLKDELWLLSEVTYLKDDQGTAAQMVLMPPEAFTVQPYQFYSNLMEVNQ EECCCEECCCCCHHHHHHHHEEECCCCCEEEEEEECCCCCEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA