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The map label for this gene is ymfP [C]

Identifier: 170025332

GI number: 170025332

Start: 3409920

End: 3411056

Strand: Reverse

Name: ymfP [C]

Synonym: YPK_3113

Alternate gene names: 170025332

Gene position: 3411056-3409920 (Counterclockwise)

Preceding gene: 170025333

Following gene: 170025331

Centisome position: 72.74

GC content: 52.24

Gene sequence:

>1137_bases
ATGCCATTTAATCGCCCCACATTAAGCGAACTGCGCCAGCGCAACCTGTCTTATATTCAATCAGAACTCAAGACCGGCGG
TAACTTATTGCGCTTCTCCAATATTGGTGTGATCAGTGATGCTGATGCCGGAATGGCGCATTTACATTATGGCTATCTGG
ATTATATCGCGCTGCAATCCACGCCTTATAATGCCACCGATGAATATCTTGCCGCGTGGGCCGCGTTGAAGGATGTGTTT
CGCAAGCCCGCCAATCCCGCCACCTGTCCTACCGTCGAGTTTAGTGGCACCGCAGGCCGAGTGATTGCAACTGGGAGCCT
GTTAAATCGGGCCGATGGTTATCAATATCGCCTCGATCATGAGGTAACATTGGACGCTGGCGGCACAGCCACTGGCTCAA
TCACGGCCGTGCTCCCTAGTGTACTTGATGATAGCTCTGGTGGTGGTGTTGCGGGGAATGCAGATGCAGGAACGTCTCTG
ACATTGGATGTGGCCATTGATGGGGTCATGTCGGTGGCCACTGCAATCGTTAAGATATCCGGTGGCGCGGATATTGAGTC
AGAAGATGCTTTTCGTTCCCGCATGTTACTGGCTTATCAAAATACTCCTCAAGGCGGCAATGATACCGATTATCGCGGCT
GGGCTTTAGCAGTGCCGGGGGTGACTCGTTGTTGGGTGAAGCGCCGCTTGCAGGGGGTGGGTACGGTCGGTATTTACATT
ATGTGTGATGACAATGATTCTGGCGGCTTCACGATCGGGAGTGATGGCATATCGCAATTCGAAGAGTGGGGCGCGGTGAA
AGCAACCGGTGATCAGGGGCGGGTAGCCGACCACATTTACCCCTTACAGCCCATTATTGCTATCATCTATGTCTGTGCAC
CGGTAGCAGCACCCGTGAATTTTGTCATTAGCGGCATCTTTACGGCAGATAGCGAAACCACCACAGCAATCAATACAGCT
ATTGATGAGGTCTTTTTTACTGAGGGTGAGCCGGGCGGTAAAATTCTGCTGTCATCACTGCTACTGGCCATCGGTGATGT
GACAGGCACCAGCGGTTTTATTCTCGACTCCCCAACGACTAACATCCAGCTTGAAACCGGACAATTACCCATCCGGGGCA
CGGTGACCTACCTATGA

Upstream 100 bases:

>100_bases
GATAATGTACCCCAACCGGTTAAATCTCATCATTGGCTACCAGCAGCCCGCTAAAACACAGGCTTCAGTCAAATTTTCAT
GGGTATGGGAGATCTAATAC

Downstream 100 bases:

>100_bases
GTCGATATTCTGTTAATGACTATACCGCCGCAATTCAATCGCTGATGCCTGGGGGCTTAGTTTGGCCCAAAATATCAGAC
GGGGTTCAAACCAGCACGTT

Product: baseplate J family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPFNRPTLSELRQRNLSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIALQSTPYNATDEYLAAWAALKDVF
RKPANPATCPTVEFSGTAGRVIATGSLLNRADGYQYRLDHEVTLDAGGTATGSITAVLPSVLDDSSGGGVAGNADAGTSL
TLDVAIDGVMSVATAIVKISGGADIESEDAFRSRMLLAYQNTPQGGNDTDYRGWALAVPGVTRCWVKRRLQGVGTVGIYI
MCDDNDSGGFTIGSDGISQFEEWGAVKATGDQGRVADHIYPLQPIIAIIYVCAPVAAPVNFVISGIFTADSETTTAINTA
IDEVFFTEGEPGGKILLSSLLLAIGDVTGTSGFILDSPTTNIQLETGQLPIRGTVTYL

Sequences:

>Translated_378_residues
MPFNRPTLSELRQRNLSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIALQSTPYNATDEYLAAWAALKDVF
RKPANPATCPTVEFSGTAGRVIATGSLLNRADGYQYRLDHEVTLDAGGTATGSITAVLPSVLDDSSGGGVAGNADAGTSL
TLDVAIDGVMSVATAIVKISGGADIESEDAFRSRMLLAYQNTPQGGNDTDYRGWALAVPGVTRCWVKRRLQGVGTVGIYI
MCDDNDSGGFTIGSDGISQFEEWGAVKATGDQGRVADHIYPLQPIIAIIYVCAPVAAPVNFVISGIFTADSETTTAINTA
IDEVFFTEGEPGGKILLSSLLLAIGDVTGTSGFILDSPTTNIQLETGQLPIRGTVTYL
>Mature_377_residues
PFNRPTLSELRQRNLSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIALQSTPYNATDEYLAAWAALKDVFR
KPANPATCPTVEFSGTAGRVIATGSLLNRADGYQYRLDHEVTLDAGGTATGSITAVLPSVLDDSSGGGVAGNADAGTSLT
LDVAIDGVMSVATAIVKISGGADIESEDAFRSRMLLAYQNTPQGGNDTDYRGWALAVPGVTRCWVKRRLQGVGTVGIYIM
CDDNDSGGFTIGSDGISQFEEWGAVKATGDQGRVADHIYPLQPIIAIIYVCAPVAAPVNFVISGIFTADSETTTAINTAI
DEVFFTEGEPGGKILLSSLLLAIGDVTGTSGFILDSPTTNIQLETGQLPIRGTVTYL

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 39838; Mature: 39707

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFNRPTLSELRQRNLSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIALQS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHEEHHHEEEEEEEC
TPYNATDEYLAAWAALKDVFRKPANPATCPTVEFSGTAGRVIATGSLLNRADGYQYRLDH
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECHHHHCCCCCEEEECC
EVTLDAGGTATGSITAVLPSVLDDSSGGGVAGNADAGTSLTLDVAIDGVMSVATAIVKIS
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHEEEC
GGADIESEDAFRSRMLLAYQNTPQGGNDTDYRGWALAVPGVTRCWVKRRLQGVGTVGIYI
CCCCCCCHHHHHHEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEE
MCDDNDSGGFTIGSDGISQFEEWGAVKATGDQGRVADHIYPLQPIIAIIYVCAPVAAPVN
EECCCCCCCEEECCHHHHHHHHCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCHH
FVISGIFTADSETTTAINTAIDEVFFTEGEPGGKILLSSLLLAIGDVTGTSGFILDSPTT
HHEEEEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCC
NIQLETGQLPIRGTVTYL
EEEEECCCEEEEEEEEEC
>Mature Secondary Structure 
PFNRPTLSELRQRNLSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIALQS
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHEEHHHEEEEEEEC
TPYNATDEYLAAWAALKDVFRKPANPATCPTVEFSGTAGRVIATGSLLNRADGYQYRLDH
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECHHHHCCCCCEEEECC
EVTLDAGGTATGSITAVLPSVLDDSSGGGVAGNADAGTSLTLDVAIDGVMSVATAIVKIS
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHEEEC
GGADIESEDAFRSRMLLAYQNTPQGGNDTDYRGWALAVPGVTRCWVKRRLQGVGTVGIYI
CCCCCCCHHHHHHEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEE
MCDDNDSGGFTIGSDGISQFEEWGAVKATGDQGRVADHIYPLQPIIAIIYVCAPVAAPVN
EECCCCCCCEEECCHHHHHHHHCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCHH
FVISGIFTADSETTTAINTAIDEVFFTEGEPGGKILLSSLLLAIGDVTGTSGFILDSPTT
HHEEEEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCC
NIQLETGQLPIRGTVTYL
EEEEECCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]