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The map label for this gene is ymfQ [H]

Identifier: 170025331

GI number: 170025331

Start: 3409327

End: 3409923

Strand: Reverse

Name: ymfQ [H]

Synonym: YPK_3112

Alternate gene names: 170025331

Gene position: 3409923-3409327 (Counterclockwise)

Preceding gene: 170025332

Following gene: 170025330

Centisome position: 72.71

GC content: 51.93

Gene sequence:

>597_bases
ATGAGTCGATATTCTGTTAATGACTATACCGCCGCAATTCAATCGCTGATGCCTGGGGGCTTAGTTTGGCCCAAAATATC
AGACGGGGTTCAAACCAGCACGTTACGAGCACTGGCAAGGTCTTACCAGCGCAGTGATGGGGATGCCCGTGATCTGCTCG
ATGCCGCCTTCCCTTCAACAGCGACCGCCATGTTGCCCGAGTGGGAAGCGACGCTTGGGTTACCGGATTTATGCGCAATA
GGTGAGATAGACAGCATTATCCAGCGCCAGCGGGCCGTAGTCTCCAAACTGTTTGGCATTGGTGGTCAGTCGGTGGCTTA
TTTTACCCATGTTGCCGGGGCGCTGGGTTACACCATCTCAATCACCCAATATCGACAGGCATGTGCCGGGATGTCGGTTT
GCGGTGACGCCATAAACGGTGAAGAGTGGCCGTTTACATGGCTGATCACTGCGCCGGAGACCACGATCAATTATGCCCAA
TGCGGTTTGACTTATTGCAGTGATCCACTGCGTTCGTGGGGAAACAAACAACTTGAATGCCGATTAACCGTATTAAACCC
ATCTCACACCATTCTTAAATTTGGCTACATCAGCTAG

Upstream 100 bases:

>100_bases
GTGATGTGACAGGCACCAGCGGTTTTATTCTCGACTCCCCAACGACTAACATCCAGCTTGAAACCGGACAATTACCCATC
CGGGGCACGGTGACCTACCT

Downstream 100 bases:

>100_bases
CTAGTCACTCTCTATTCATTTTTAAGCGCCTTACCCGGCGAGGATTTTCTATGCAAAAAATTGGTGATATACCGAATACG
CGCGCCGACAGTAACGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSRYSVNDYTAAIQSLMPGGLVWPKISDGVQTSTLRALARSYQRSDGDARDLLDAAFPSTATAMLPEWEATLGLPDLCAI
GEIDSIIQRQRAVVSKLFGIGGQSVAYFTHVAGALGYTISITQYRQACAGMSVCGDAINGEEWPFTWLITAPETTINYAQ
CGLTYCSDPLRSWGNKQLECRLTVLNPSHTILKFGYIS

Sequences:

>Translated_198_residues
MSRYSVNDYTAAIQSLMPGGLVWPKISDGVQTSTLRALARSYQRSDGDARDLLDAAFPSTATAMLPEWEATLGLPDLCAI
GEIDSIIQRQRAVVSKLFGIGGQSVAYFTHVAGALGYTISITQYRQACAGMSVCGDAINGEEWPFTWLITAPETTINYAQ
CGLTYCSDPLRSWGNKQLECRLTVLNPSHTILKFGYIS
>Mature_197_residues
SRYSVNDYTAAIQSLMPGGLVWPKISDGVQTSTLRALARSYQRSDGDARDLLDAAFPSTATAMLPEWEATLGLPDLCAIG
EIDSIIQRQRAVVSKLFGIGGQSVAYFTHVAGALGYTISITQYRQACAGMSVCGDAINGEEWPFTWLITAPETTINYAQC
GLTYCSDPLRSWGNKQLECRLTVLNPSHTILKFGYIS

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=193, Percent_Identity=34.1968911917098, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 21543; Mature: 21411

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYSVNDYTAAIQSLMPGGLVWPKISDGVQTSTLRALARSYQRSDGDARDLLDAAFPST
CCCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
ATAMLPEWEATLGLPDLCAIGEIDSIIQRQRAVVSKLFGIGGQSVAYFTHVAGALGYTIS
HHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEE
ITQYRQACAGMSVCGDAINGEEWPFTWLITAPETTINYAQCGLTYCSDPLRSWGNKQLEC
HHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHCHHHHHHHHHHHCCCEEEE
RLTVLNPSHTILKFGYIS
EEEEECCCCEEEEECCCC
>Mature Secondary Structure 
SRYSVNDYTAAIQSLMPGGLVWPKISDGVQTSTLRALARSYQRSDGDARDLLDAAFPST
CCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
ATAMLPEWEATLGLPDLCAIGEIDSIIQRQRAVVSKLFGIGGQSVAYFTHVAGALGYTIS
HHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEE
ITQYRQACAGMSVCGDAINGEEWPFTWLITAPETTINYAQCGLTYCSDPLRSWGNKQLEC
HHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHCHHHHHHHHHHHCCCEEEE
RLTVLNPSHTILKFGYIS
EEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]