| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is crcB1 [H]
Identifier: 170025251
GI number: 170025251
Start: 3331510
End: 3331893
Strand: Direct
Name: crcB1 [H]
Synonym: YPK_3030
Alternate gene names: 170025251
Gene position: 3331510-3331893 (Clockwise)
Preceding gene: 170025248
Following gene: 170025253
Centisome position: 71.04
GC content: 47.4
Gene sequence:
>384_bases ATGTTTAATACATTACTTGCAGTGTTTATTGGTGGCGGTGTGGGCAGCATGGCCCGTTGGTTGGTCAGTTTGAAGTTAAA CAGTGCATCGGCTCACTTACCGGTAGGTACGCTTATCGTCAACCTGGTCGGTGCCTTTATTATTGGCCTGACACTGGCGC TTTTTAGCCGAATGACTCATATTGATCCCGTTTGGAAGCTACTGATTACCACCGGTTTTTGTGGGGGCCTCACGACGTTC TCCACCTTTTCTGTCGAAGTGGTCTATCTAATCCAAGAGGGAAAATTAGCGTGGGCTGCCGGAACAATTTTGCTCAATGT GGCGGGTTCACTGGCAATGACGATGCTGGCTTTTATATTGGTCAATAACTTTGCCAGCCAATAA
Upstream 100 bases:
>100_bases TTCTCATTAGGGTACGTAGGGCTACCAACGAGCCTTTCTGAAAAGATCTGTGGGTAAACAAAACGCCCCAATGGTCAGTA TCTGTTAGAGAAAAGTGCCT
Downstream 100 bases:
>100_bases TGGCTAGTGGCCTATGATTAAACACTTCAAGGAGTGAATAGCGTGGCTATGGTGTTTATTCAGTAGAAAATAGTGCTACT AATAATATCGCCTTAATGTT
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLALFSRMTHIDPVWKLLITTGFCGGLTTF STFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ
Sequences:
>Translated_127_residues MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLALFSRMTHIDPVWKLLITTGFCGGLTTF STFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ >Mature_127_residues MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLALFSRMTHIDPVWKLLITTGFCGGLTTF STFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=122, Percent_Identity=63.9344262295082, Blast_Score=158, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13449; Mature: 13449
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLALFSRMTH CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC IDPVWKLLITTGFCGGLTTFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFIL CCHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH VNNFASQ HHHHCCC >Mature Secondary Structure MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLALFSRMTH CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC IDPVWKLLITTGFCGGLTTFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFIL CCHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH VNNFASQ HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]