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The map label for this gene is 170025253

Identifier: 170025253

GI number: 170025253

Start: 3332804

End: 3333283

Strand: Direct

Name: 170025253

Synonym: YPK_3032

Alternate gene names: NA

Gene position: 3332804-3333283 (Clockwise)

Preceding gene: 170025251

Following gene: 170025255

Centisome position: 71.07

GC content: 36.25

Gene sequence:

>480_bases
ATGAACGGTAGAATAACAACTTTTTTTGAAGATAAAGGCTTTGGTTTTATCACCGATGAAAACGGCGATAACCGTTATTT
TCACGTTATAAAAGTTGCTAATCCCGAGATGATCAAAAAGGGTGCTGAAGTAACCTTTGAACCGACAACCAACACCAAAG
GGTTATCAGCATTCGCTGTAAAAGTAGCGATTGAGAGCAAATATATATTCATCGCTAATGAAAGGATAAAGCTGACCAGT
ATCAAGTCATTCAATACCTTTACAAAAGAAGTCCCTGCTCAAGCCGAGGTTGATAAAGCCAATACAATATTATCAGTAAA
CTTACTGATGAATAAAATTAGGCCACAGGAAGAGGACATTTCAGAGAAAACCGTACCACTGAAAATGCTGTCGATAACAA
CATTCCAAAATGTGACATACACATTTTCTGAACACGAAGTCGATATTGATAGTACGGTTGCTAAATTAAAGAGTATTTAA

Upstream 100 bases:

>100_bases
TCTCGGGGTCTAAACGCCTCCGGTAAACTGCCAGACTGTATCTGAACGTCATTCACCTGTATTATACTTATCCATTGGAT
ACACTAATATGAGATGCATG

Downstream 100 bases:

>100_bases
TATTGATTTTGGGACTTGCCAAGGCCAGCTAGCCCTGAAATATTTGGGGCTACCAGTCGCAGGTAGTTGGTGATAGTCGT
TGATGGTTGATGATAGTGAT

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: Cold Shock Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAVKVAIESKYIFIANERIKLTS
IKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDISEKTVPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI

Sequences:

>Translated_159_residues
MNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAVKVAIESKYIFIANERIKLTS
IKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDISEKTVPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI
>Mature_159_residues
MNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAVKVAIESKYIFIANERIKLTS
IKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDISEKTVPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17922; Mature: 17922

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAV
CCCEEEEEEECCCCEEEECCCCCCEEEEEEEECCHHHHHCCCCEEEECCCCCCCCEEEEE
KVAIESKYIFIANERIKLTSIKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDI
EEEEECEEEEEECCEEEEEEECCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCC
SEKTVPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI
CCCCCCEEEEEEEEECCEEEEECCCEECHHHHHHHHHCC
>Mature Secondary Structure
MNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAV
CCCEEEEEEECCCCEEEECCCCCCEEEEEEEECCHHHHHCCCCEEEECCCCCCCCEEEEE
KVAIESKYIFIANERIKLTSIKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDI
EEEEECEEEEEECCEEEEEEECCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCC
SEKTVPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI
CCCCCCEEEEEEEEECCEEEEECCCEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA