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The map label for this gene is msgA [H]

Identifier: 170025054

GI number: 170025054

Start: 3114780

End: 3115022

Strand: Direct

Name: msgA [H]

Synonym: YPK_2830

Alternate gene names: 170025054

Gene position: 3114780-3115022 (Clockwise)

Preceding gene: 170025053

Following gene: 170025055

Centisome position: 66.42

GC content: 44.03

Gene sequence:

>243_bases
ATGCGTGTTGAATTAATTTATGACAAGCGGAATGTCGGTTCCCTTGCTAACGCCACTGAAATTATTAGAGCAGAGCTCAC
CAAGCGCGTACATCGTGTCTTCCCCGATGCGGAGGTTAACGTCAAAGCGATGCATGCCAATGGCATCAATACCAATGCCA
GCAAACAAGAAAAGTCAGTACTCAACCGTTTGGTTGAAGAGATGTTTGATGAAGCCGATGAATGGTTGAACAATGAATTC
TAA

Upstream 100 bases:

>100_bases
ACCAACAAATCACCTGCGGTAATTTATTTATGCCATCAGGGTTGTCTGCCACCCACAAATACTGTATATTATCACAGTAC
TTATTGTTCAGGAAAAAGTC

Downstream 100 bases:

>100_bases
CAGAAATTTATCCGGGTAGATTGGCCCGGGATCTATTCTCACCAGCATGTTACCGGCCCTCTCAATGAGAAATTAATTTT
TTTAAAATTTTTTTAATCTT

Product: DinI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MRVELIYDKRNVGSLANATEIIRAELTKRVHRVFPDAEVNVKAMHANGINTNASKQEKSVLNRLVEEMFDEADEWLNNEF

Sequences:

>Translated_80_residues
MRVELIYDKRNVGSLANATEIIRAELTKRVHRVFPDAEVNVKAMHANGINTNASKQEKSVLNRLVEEMFDEADEWLNNEF
>Mature_80_residues
MRVELIYDKRNVGSLANATEIIRAELTKRVHRVFPDAEVNVKAMHANGINTNASKQEKSVLNRLVEEMFDEADEWLNNEF

Specific function: Affects survival in macrophages [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010391 [H]

Pfam domain/function: PF06183 DinI [H]

EC number: NA

Molecular weight: Translated: 9231; Mature: 9231

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVELIYDKRNVGSLANATEIIRAELTKRVHRVFPDAEVNVKAMHANGINTNASKQEKSV
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHH
LNRLVEEMFDEADEWLNNEF
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVELIYDKRNVGSLANATEIIRAELTKRVHRVFPDAEVNVKAMHANGINTNASKQEKSV
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHH
LNRLVEEMFDEADEWLNNEF
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]