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The map label for this gene is ymfQ [H]

Identifier: 170025034

GI number: 170025034

Start: 3098116

End: 3098718

Strand: Reverse

Name: ymfQ [H]

Synonym: YPK_2810

Alternate gene names: 170025034

Gene position: 3098718-3098116 (Counterclockwise)

Preceding gene: 170025035

Following gene: 170025033

Centisome position: 66.08

GC content: 54.73

Gene sequence:

>603_bases
ATGAGCCGCTATTCCGTCAGTGAATATACCGGAGCGTTACAAGCGCTGATGCCGATGGGATTAGTGTGGCCCCGACGGCC
CGATGGCATACAGACCGAGGTACTGCGGGCGTTGGCGAATGCTTACCAACGCAGCGATGAAGATGCACAAGATCTGCTGT
CGGCGGCTTTCCCGGCCACCGCCACGGCTCTCTTACCTGAATGGGAAGCGACACTGGGCTTGCCCGATTTGTGTGCGATT
GGTGAGATCGATAGCATGATCCAACGCCAGCGGGCGGTGGTCGCCAAATTGTTTGGTATTGGCGGCCAATCGGCGGCGTA
CTTTATCCGCGTGGCAAAGGCTCTGGGCTATGACATTACCGTTACCCAATACCGGCAAGCCTGCGCGGGTATGTCGGTGT
GCCGTGATGCATTGAACGGTGAAGAGTGGCCTTTTACCTGGCTAATTACCGCACCGGAAACCACCATTCATAATGCCCAA
TGCAGCTTAACGTATTGCAGTGATCCGCTGCGTTCGTGGGGCAATAAACAGCTTGAATGCCGGTTAGCGGTATTAAACCC
GTCCCATTCTATTCTGAAGTTTGGCTATACCCTGCTTAGTTGA

Upstream 100 bases:

>100_bases
GCGAAGTACCTGGAAGCGGAGGGTTTATTATGGCATCCCCGTCGGCCAATATTGAACTGCAAACTGGCAAACTCCCCGTT
CGGGGTACAGTGAGTTACCT

Downstream 100 bases:

>100_bases
TATTTCAGTGTGTCTGTCTGGCGGCCACGCCAAGTACTTCGGGTCATTATTCATTAACCATTTCTATTTTATCGCTTTAA
CCAGTGAGGTATTACCATGC

Product: putative bacteriophage protein GP48

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSRYSVSEYTGALQALMPMGLVWPRRPDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCAI
GEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQ
CSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Sequences:

>Translated_200_residues
MSRYSVSEYTGALQALMPMGLVWPRRPDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCAI
GEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQ
CSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS
>Mature_199_residues
SRYSVSEYTGALQALMPMGLVWPRRPDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCAIG
EIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQC
SLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=192, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 21996; Mature: 21865

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYSVSEYTGALQALMPMGLVWPRRPDGIQTEVLRALANAYQRSDEDAQDLLSAAFPAT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH
ATALLPEWEATLGLPDLCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDIT
HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
VTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLEC
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCEEEEEECCHHHHHHCCCEEEE
RLAVLNPSHSILKFGYTLLS
EEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
SRYSVSEYTGALQALMPMGLVWPRRPDGIQTEVLRALANAYQRSDEDAQDLLSAAFPAT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH
ATALLPEWEATLGLPDLCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDIT
HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
VTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLEC
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCEEEEEECCHHHHHHCCCEEEE
RLAVLNPSHSILKFGYTLLS
EEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]