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The map label for this gene is ymfP [C]

Identifier: 170025035

GI number: 170025035

Start: 3098715

End: 3099851

Strand: Reverse

Name: ymfP [C]

Synonym: YPK_2811

Alternate gene names: 170025035

Gene position: 3099851-3098715 (Counterclockwise)

Preceding gene: 170025036

Following gene: 170025034

Centisome position: 66.1

GC content: 54.44

Gene sequence:

>1137_bases
ATGCCATTTAATCGACCCACGTTAAGTGAATTGCGGCAGCGGAATCAGTCTTATATTCAATCGGAACTGAAAACCGGCGG
CAATTTATTGCGTTTCTCTAATATCGGCGTGATCAGTGATGCCGATGCCGGGATGGCGCACCTGCATTACGGCTATCTGG
ATTATATCGCCCGGCAAGCCACCCCCTATAATGCTACCGACGAGTATCTGGCGGCTTGGGGGGCGCTGAAAGATGTGTTC
CGCAAAGCGGCCAATCCCGCCACCAGTAACGAGGTCCGGTTCAGCGGTATTGCCGGGCGAGTTATTCCTGCTGGTCGCCT
GCTGAATCGGGCCGATGGTTACCAGTATCAGCTTGATAAAGAAGTCATTATTGCCGAGCAGGGCAGTGCGCTCGGTGAAA
TTACCGCTATCTTGCCCAGCCCGTTGGACGATGCAACTGGCGGCGGCAATCGGGGTAACAGCCCGGCGGGAACGGTACTG
ACGCTGGATATTGCAATTGACGGGGTTCAGGCCACGGCCACCGCGTTGACTAAAATTTCTGGTGGTGCGGATATTGAATC
CGAAGATGCATTTCGTTCTCGTATGTTATTGGCCTACCAGAACGTCCCGCAAGGTGGCAATGACACCGATTATCAATCCT
GGGCATTAGCGGTACCGGGAGTCACTCGCTGCTGGGTGAAACGGCGGTTGATGGGGGCGGGCACCGTTGGGGTGTATATC
ATGTGCGATGATAACGACCACGGCGGCTTCCCGCAGGGAACTGACGGCATCTCATCCCTTGAAGAGTGGGGGGCGGTAAA
AGCCACTGGCGATCAGGGGCGGGTAGCGGACGCAATCTATCCACAACAACCTATTATTGCTCTGGTGTATGTTTGCGCGC
CTGTCGCTCAAGCGATTGATTTTGTGATCAGCGGCATCTCTTATGCTGACAGTACAACAACCGCCGCCATCAATACCGCT
ATTGATGAGGTGTTTTTCACCGAAGGGCAACCCGGTGGAAAAATCCTGTGGTCGTCGCTGTTGCTGGCCATCGGCGAAGT
ACCTGGAAGCGGAGGGTTTATTATGGCATCCCCGTCGGCCAATATTGAACTGCAAACTGGCAAACTCCCCGTTCGGGGTA
CAGTGAGTTACCTATGA

Upstream 100 bases:

>100_bases
CCTGGTGCTGGTGGTGAGTTACCAACAACCCAGCCAAACACGATCAGCTAATCAAACACAGTCATCAATTAAATTTTCAT
GGGTATGGGAGGAGTAATTC

Downstream 100 bases:

>100_bases
GCCGCTATTCCGTCAGTGAATATACCGGAGCGTTACAAGCGCTGATGCCGATGGGATTAGTGTGGCCCCGACGGCCCGAT
GGCATACAGACCGAGGTACT

Product: baseplate J family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPFNRPTLSELRQRNQSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIARQATPYNATDEYLAAWGALKDVF
RKAANPATSNEVRFSGIAGRVIPAGRLLNRADGYQYQLDKEVIIAEQGSALGEITAILPSPLDDATGGGNRGNSPAGTVL
TLDIAIDGVQATATALTKISGGADIESEDAFRSRMLLAYQNVPQGGNDTDYQSWALAVPGVTRCWVKRRLMGAGTVGVYI
MCDDNDHGGFPQGTDGISSLEEWGAVKATGDQGRVADAIYPQQPIIALVYVCAPVAQAIDFVISGISYADSTTTAAINTA
IDEVFFTEGQPGGKILWSSLLLAIGEVPGSGGFIMASPSANIELQTGKLPVRGTVSYL

Sequences:

>Translated_378_residues
MPFNRPTLSELRQRNQSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIARQATPYNATDEYLAAWGALKDVF
RKAANPATSNEVRFSGIAGRVIPAGRLLNRADGYQYQLDKEVIIAEQGSALGEITAILPSPLDDATGGGNRGNSPAGTVL
TLDIAIDGVQATATALTKISGGADIESEDAFRSRMLLAYQNVPQGGNDTDYQSWALAVPGVTRCWVKRRLMGAGTVGVYI
MCDDNDHGGFPQGTDGISSLEEWGAVKATGDQGRVADAIYPQQPIIALVYVCAPVAQAIDFVISGISYADSTTTAAINTA
IDEVFFTEGQPGGKILWSSLLLAIGEVPGSGGFIMASPSANIELQTGKLPVRGTVSYL
>Mature_377_residues
PFNRPTLSELRQRNQSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIARQATPYNATDEYLAAWGALKDVFR
KAANPATSNEVRFSGIAGRVIPAGRLLNRADGYQYQLDKEVIIAEQGSALGEITAILPSPLDDATGGGNRGNSPAGTVLT
LDIAIDGVQATATALTKISGGADIESEDAFRSRMLLAYQNVPQGGNDTDYQSWALAVPGVTRCWVKRRLMGAGTVGVYIM
CDDNDHGGFPQGTDGISSLEEWGAVKATGDQGRVADAIYPQQPIIALVYVCAPVAQAIDFVISGISYADSTTTAAINTAI
DEVFFTEGQPGGKILWSSLLLAIGEVPGSGGFIMASPSANIELQTGKLPVRGTVSYL

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 40018; Mature: 39887

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFNRPTLSELRQRNQSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIARQA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHCC
TPYNATDEYLAAWGALKDVFRKAANPATSNEVRFSGIAGRVIPAGRLLNRADGYQYQLDK
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECHHHHHHHCCCCEEEECC
EVIIAEQGSALGEITAILPSPLDDATGGGNRGNSPAGTVLTLDIAIDGVQATATALTKIS
EEEEEECCCCHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCC
GGADIESEDAFRSRMLLAYQNVPQGGNDTDYQSWALAVPGVTRCWVKRRLMGAGTVGVYI
CCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEE
MCDDNDHGGFPQGTDGISSLEEWGAVKATGDQGRVADAIYPQQPIIALVYVCAPVAQAID
EEECCCCCCCCCCCCHHHHHHHCCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
FVISGISYADSTTTAAINTAIDEVFFTEGQPGGKILWSSLLLAIGEVPGSGGFIMASPSA
HHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCC
NIELQTGKLPVRGTVSYL
CEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PFNRPTLSELRQRNQSYIQSELKTGGNLLRFSNIGVISDADAGMAHLHYGYLDYIARQA
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHCC
TPYNATDEYLAAWGALKDVFRKAANPATSNEVRFSGIAGRVIPAGRLLNRADGYQYQLDK
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECHHHHHHHCCCCEEEECC
EVIIAEQGSALGEITAILPSPLDDATGGGNRGNSPAGTVLTLDIAIDGVQATATALTKIS
EEEEEECCCCHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCC
GGADIESEDAFRSRMLLAYQNVPQGGNDTDYQSWALAVPGVTRCWVKRRLMGAGTVGVYI
CCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEE
MCDDNDHGGFPQGTDGISSLEEWGAVKATGDQGRVADAIYPQQPIIALVYVCAPVAQAID
EEECCCCCCCCCCCCHHHHHHHCCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
FVISGISYADSTTTAAINTAIDEVFFTEGQPGGKILWSSLLLAIGEVPGSGGFIMASPSA
HHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCC
NIELQTGKLPVRGTVSYL
CEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]