Click here to switch to the map view.

The map label for this gene is fecD [C]

Identifier: 170024975

GI number: 170024975

Start: 3032743

End: 3033825

Strand: Reverse

Name: fecD [C]

Synonym: YPK_2750

Alternate gene names: 170024975

Gene position: 3033825-3032743 (Counterclockwise)

Preceding gene: 170024976

Following gene: 170024974

Centisome position: 64.69

GC content: 51.71

Gene sequence:

>1083_bases
ATGAGTGTAACTACTGAACCCATGACAAAAACGCATAATCCGCCTGATCTCAGTGTCATGGGGCGTTATCAGAACATTGT
ACGCCACCGCTTATTAGTTATGGGTGTGCTGGTGCTCGCCATCTTGGGCTGTTTGCTGTTGGATTTCACCATGGGGCCTT
CTGGTTTAACGTTGTCATCGCTGTGGCAGACGTTGATTGATCCGGCCAGTGCCGATGCCGGTACCCGAGTCATCGTCTGG
GATATTCGCTTACCGTATGCTTTGATGGCGGTGGTGATTGGCCTGTCTCTCGGTCTTGCCGGGGCAGAAATGCAAACCAT
TTTAAATAATCCACTCGCCAGCCCGTTTACGTTGGGAGTGTCTTCCGCCGCCGCATTCGGTGCCGCGTTGGCGATTGTCT
CGGGGATTGGTATACCGGGTGTCCCTGACCAGTGGTTTATTTCGGTTAACGCTTTTATTTTTGCGCTATTCGCCGCGCTG
ATGCTTGATGGCATCACCCGCTGGACGCGAGTTGCAAGCTCGGGTGTGGTGTTGTTTGGTATTGCCTTGGTCTTTACCTT
CAATGCGCTGGTATCAATGATGCAGTTCATTGCCAGTGAAGACACGCTACAAGGCCTGGTGTTCTGGACTATGGGCAGTC
TGGCACGAGCATCTTGGGCCAAACTGGGTATTATGCTGGCGGTGTTTGCCTTGATGTTACCGCTGTCGATGATGAATTCA
TGGAAGCTGACAGCCCTACGTTTAGGCGAAGATCGCGCCATTAGCTTTGGTATTGATGTGCGCCGTTTACGCCTGGGGAC
ATTATTGCGCATCAGTATGCTATCAGCACTGGCGGTGGCCTTTGTCGGCCCGATTGGTTTCATCGGGTTAGTCGCACCGC
ATATCGCACGCATGATTTTTGGTGAAGATCACCGTTTTTACTTACCAGCCAGTGCCCTGATTGGTGCATTGGTGCTGTCT
ATGGCCTCTATCGCATCGAAAAATCTGATCCCTGGCATTATTATTCCGGTTGGGATCGTCACCTCGCTGGTAGGGGTGCC
ATTCTTCCTGAGTATTATTCTGCGCCATAGGGGGAATGTATGA

Upstream 100 bases:

>100_bases
GTACTAAATATAAGCCGTATCAAATATAAGCTGTATCAAATAGAGCCCGTAACAGATTGGTCTATAGCAGATGCCGCCCA
GAGTAGGTAGATAGAAGCAA

Downstream 100 bases:

>100_bases
CTGCGGGTTTACGTATTGAGCGTTTTTATGCGGGCTATCCCAAACGGCCAGTGATCCAAAACCTGAATGTCCCCTTGCTC
CCTCGCGGCAAAATTACCGT

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSVTTEPMTKTHNPPDLSVMGRYQNIVRHRLLVMGVLVLAILGCLLLDFTMGPSGLTLSSLWQTLIDPASADAGTRVIVW
DIRLPYALMAVVIGLSLGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVSGIGIPGVPDQWFISVNAFIFALFAAL
MLDGITRWTRVASSGVVLFGIALVFTFNALVSMMQFIASEDTLQGLVFWTMGSLARASWAKLGIMLAVFALMLPLSMMNS
WKLTALRLGEDRAISFGIDVRRLRLGTLLRISMLSALAVAFVGPIGFIGLVAPHIARMIFGEDHRFYLPASALIGALVLS
MASIASKNLIPGIIIPVGIVTSLVGVPFFLSIILRHRGNV

Sequences:

>Translated_360_residues
MSVTTEPMTKTHNPPDLSVMGRYQNIVRHRLLVMGVLVLAILGCLLLDFTMGPSGLTLSSLWQTLIDPASADAGTRVIVW
DIRLPYALMAVVIGLSLGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVSGIGIPGVPDQWFISVNAFIFALFAAL
MLDGITRWTRVASSGVVLFGIALVFTFNALVSMMQFIASEDTLQGLVFWTMGSLARASWAKLGIMLAVFALMLPLSMMNS
WKLTALRLGEDRAISFGIDVRRLRLGTLLRISMLSALAVAFVGPIGFIGLVAPHIARMIFGEDHRFYLPASALIGALVLS
MASIASKNLIPGIIIPVGIVTSLVGVPFFLSIILRHRGNV
>Mature_359_residues
SVTTEPMTKTHNPPDLSVMGRYQNIVRHRLLVMGVLVLAILGCLLLDFTMGPSGLTLSSLWQTLIDPASADAGTRVIVWD
IRLPYALMAVVIGLSLGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVSGIGIPGVPDQWFISVNAFIFALFAALM
LDGITRWTRVASSGVVLFGIALVFTFNALVSMMQFIASEDTLQGLVFWTMGSLARASWAKLGIMLAVFALMLPLSMMNSW
KLTALRLGEDRAISFGIDVRRLRLGTLLRISMLSALAVAFVGPIGFIGLVAPHIARMIFGEDHRFYLPASALIGALVLSM
ASIASKNLIPGIIIPVGIVTSLVGVPFFLSIILRHRGNV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=321, Percent_Identity=32.7102803738318, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1788004, Length=280, Percent_Identity=33.2142857142857, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1790741, Length=285, Percent_Identity=33.6842105263158, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786805, Length=293, Percent_Identity=35.8361774744027, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786347, Length=278, Percent_Identity=31.6546762589928, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786804, Length=284, Percent_Identity=33.0985915492958, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38407; Mature: 38275

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTTEPMTKTHNPPDLSVMGRYQNIVRHRLLVMGVLVLAILGCLLLDFTMGPSGLTLSS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LWQTLIDPASADAGTRVIVWDIRLPYALMAVVIGLSLGLAGAEMQTILNNPLASPFTLGV
HHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCH
SSAAAFGAALAIVSGIGIPGVPDQWFISVNAFIFALFAALMLDGITRWTRVASSGVVLFG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IALVFTFNALVSMMQFIASEDTLQGLVFWTMGSLARASWAKLGIMLAVFALMLPLSMMNS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WKLTALRLGEDRAISFGIDVRRLRLGTLLRISMLSALAVAFVGPIGFIGLVAPHIARMIF
CCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEDHRFYLPASALIGALVLSMASIASKNLIPGIIIPVGIVTSLVGVPFFLSIILRHRGNV
CCCCCEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVTTEPMTKTHNPPDLSVMGRYQNIVRHRLLVMGVLVLAILGCLLLDFTMGPSGLTLSS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LWQTLIDPASADAGTRVIVWDIRLPYALMAVVIGLSLGLAGAEMQTILNNPLASPFTLGV
HHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCH
SSAAAFGAALAIVSGIGIPGVPDQWFISVNAFIFALFAALMLDGITRWTRVASSGVVLFG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IALVFTFNALVSMMQFIASEDTLQGLVFWTMGSLARASWAKLGIMLAVFALMLPLSMMNS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WKLTALRLGEDRAISFGIDVRRLRLGTLLRISMLSALAVAFVGPIGFIGLVAPHIARMIF
CCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEDHRFYLPASALIGALVLSMASIASKNLIPGIIIPVGIVTSLVGVPFFLSIILRHRGNV
CCCCCEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]