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The map label for this gene is 170024976

Identifier: 170024976

GI number: 170024976

Start: 3034000

End: 3035169

Strand: Reverse

Name: 170024976

Synonym: YPK_2751

Alternate gene names: NA

Gene position: 3035169-3034000 (Counterclockwise)

Preceding gene: 170024977

Following gene: 170024975

Centisome position: 64.72

GC content: 47.61

Gene sequence:

>1170_bases
ATGGGAACAGGTAAGGGGTTTGGCGTGAAATGTGTTTCACTGAAAATGGCTAAAGGGTTAACTATCAGTTTGTTATTCGG
CTGGGCCTTGATGGCTGGCTCTAGTGCCTTGGCGGCAACAGTGACTGACATGGCTGGCCGTACGGTCACCATACCGGCTA
AAGTTGAGCGTATTTTACTGGGTGAAGGGCGCTTGTTCTATGCTGTCTCTTTATTGGAAGGTAATAAACCGTTAGACCGT
ATTGTTGGCTGGCAGGGCGATTTTCGCAAACTGGATCCCCAAACTTACGCCATCTATAAAGCAAAATTCCCGCAAATTGA
TCAAATCCCCCTTATTGGTAACACGACCGCTGACAGTATCAGCCCGGAAAAGGTGCTCACCTTAAATCCGGATATCGCTA
TTTTTGGTTTATCTGGCCATGGTCCAGGTAAAGGCAGTGAATTAGTCAAGCAACTAGAGAAAGCCGGTGTACCGGTCGTT
TTCGTGGATTTCCGTAATTCGCCATTAAAGAACACGTTGCCAAGTATGCGCTTGCTGGGCAAAGCCCTGCACCGCGAGCA
GCAAGCTGAAAACTACATTAATTTTTATCAAGATAATGTGGACAAGGTGACCGATATCACCAATAAAATCCCGGAAGATA
AAAAACCGAGCGTATTTATTGAATTACGTGCAGGGGCGTCGGAAGAGTGCTGTGGTACTGCCGGGAAGGGCAATATGGGC
GACTTTATCGATCAGGCGGGCGGCAATAATATTGCTAAAAATCTGCTGCCTGGCTCGCTAGGTACGGTGAATTTAGAAAA
AGTATTGGCGGCGAAACCAGATATCTACATTGCCAGCGGGGGCAAATCACCAGGCAGCGATGCACCGGGTGTCGTCCTTG
GTGCGCAGGTAACGCCCGAGCAGGCACAGGCCTCGTTGCAAAAAATTCTGGGCCGTAAGGGAATCAATACCCTAAGTGCG
GTCAACACGGGTCATAGCTATGCGATTTGGCACAATTACTACAATTCACCGTATAACGTATTGGCAATTCAAAGCTTTGC
CAAATGGTTCTATCCAGAGCAATTTGCTGATCTCGATCCGAAAAAAACCATGGACAGCCTGTATTCACAGTTTCTAGCCG
TCGAGCCAAGTGGCACCTATTGGATTGAAGCAAAAAGAGAGTTGGATTGA

Upstream 100 bases:

>100_bases
ATAATATTACCAGGCCAACACTTACAAAAAGTTACGTCCAATTACTTATGGCAATCTTATTGATAAGTATTATCATTTGC
TTTATTGTTAGCGCCATCTT

Downstream 100 bases:

>100_bases
AGCAAAAATAGTTGGATTGAAGCCAAAAAATAGCCGGCGCGAAGTGGCCGAGTGAATGTGAAGTAACCTAATCCGTACTA
AATATAAGCCGTATCAAATA

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MGTGKGFGVKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYAVSLLEGNKPLDR
IVGWQGDFRKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVV
FVDFRNSPLKNTLPSMRLLGKALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMG
DFIDQAGGNNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQKILGRKGINTLSA
VNTGHSYAIWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLYSQFLAVEPSGTYWIEAKRELD

Sequences:

>Translated_389_residues
MGTGKGFGVKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYAVSLLEGNKPLDR
IVGWQGDFRKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVV
FVDFRNSPLKNTLPSMRLLGKALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMG
DFIDQAGGNNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQKILGRKGINTLSA
VNTGHSYAIWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLYSQFLAVEPSGTYWIEAKRELD
>Mature_388_residues
GTGKGFGVKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYAVSLLEGNKPLDRI
VGWQGDFRKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVF
VDFRNSPLKNTLPSMRLLGKALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMGD
FIDQAGGNNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQKILGRKGINTLSAV
NTGHSYAIWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLYSQFLAVEPSGTYWIEAKRELD

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 42019; Mature: 41887

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTGKGFGVKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILL
CCCCCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCEEECHHHEEEEEE
GEGRLFYAVSLLEGNKPLDRIVGWQGDFRKLDPQTYAIYKAKFPQIDQIPLIGNTTADSI
CCCCEEEEEEEECCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCC
SPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVFVDFRNSPLKNTLPSMRLLG
CCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
KALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCHH
DFIDQAGGNNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPE
HHHHHCCCCHHHHHCCCCCCCCEEHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCHH
QAQASLQKILGRKGINTLSAVNTGHSYAIWHNYYNSPYNVLAIQSFAKWFYPEQFADLDP
HHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHCCCHHHCCCCH
KKTMDSLYSQFLAVEPSGTYWIEAKRELD
HHHHHHHHHHHEEECCCCCEEEEEECCCC
>Mature Secondary Structure 
GTGKGFGVKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILL
CCCCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCEEECHHHEEEEEE
GEGRLFYAVSLLEGNKPLDRIVGWQGDFRKLDPQTYAIYKAKFPQIDQIPLIGNTTADSI
CCCCEEEEEEEECCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCC
SPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVFVDFRNSPLKNTLPSMRLLG
CCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
KALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCHH
DFIDQAGGNNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPE
HHHHHCCCCHHHHHCCCCCCCCEEHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCHH
QAQASLQKILGRKGINTLSAVNTGHSYAIWHNYYNSPYNVLAIQSFAKWFYPEQFADLDP
HHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHCCCHHHCCCCH
KKTMDSLYSQFLAVEPSGTYWIEAKRELD
HHHHHHHHHHHEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]