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The map label for this gene is pqiA [H]

Identifier: 170024864

GI number: 170024864

Start: 2895316

End: 2896602

Strand: Reverse

Name: pqiA [H]

Synonym: YPK_2639

Alternate gene names: 170024864

Gene position: 2896602-2895316 (Counterclockwise)

Preceding gene: 170024865

Following gene: 170024863

Centisome position: 61.77

GC content: 47.79

Gene sequence:

>1287_bases
TTGTGTGCTGTTATTGAGCCTGTTAATGGTGGGCAATCAGGGAGTATTCTCCTGTGCCAGCAGTGTGATATGTCAGTGGC
CTTACCCCCCTTGCCTTATGGCACTAAAGCGGTATGCCCCCGTTGTAAAACGACACTGACTGCGCGGTGGGAAGAGCCTC
GCAAGCGGCCAATAGGCTATGCGCTTAGCGCTCTGTTTATGCTGTTGTTAGCTAATCTATTCCCTTTCGTCGATATGCGT
GTGGCGGGGATCACCAGCGAAATAAGTTTGATCCAAATCCCTCAAGTGATGCTGTCTGACAATTACATCAGCATGGCAAC
GCTGTTTATGGTATTGGTTCAGCTAATCCCCGCATTTTGTATGGTAGCGATTATTCTGCTTTGCCTGCGGGTGCGTATGC
CAATCCGTTGGAAAACCGCCATGGCGAAAGCGCTGTTCCAGTTTAAAACCTGGTGCATGGTTGAGATTTTCCTCGCCGGC
GTATTGGTGAGTTTCGTCAAACTGATGGCCTATGGTGAAATCGGTATTGGCAGCAGTTTTATCCCTTACTGTTTATTCTG
TTTGTTACAAGTGCGCGCTTTTCAGTGCATTGATCGTCATTGGATGTGGCAAGACATCGCCCCTGCGCCAGCAGTGCCTT
ACCGATTGATCCCAGGCCGTACTGGCTTGCGTCAAGGTTTACGCTCCTGCTCATGCTGTACAGCAATTTTGCCGCAAGAC
CAAGTAGAGTGCCCGCGTTGTTATACCCACGGTTATGTTCGCCGCCGTAATAGCTTGCAGTGGACGATGGCGTTATTAGT
CACTTCGATCCTGTTATATATTCCGGCAAATATGATGCCGATAATGATAACTGAAAGTTTGGGTAACCAAATGAACTCCA
CCATTATGGCTGGGGTGATTTTTCTCTGGAGTGAAGGTTCTTACCCCGTGGCGTTGGTGATTTTTATTGCCAGTATCATG
GTGCCATCGTTAAAAATGTTGGCGATTGCCTGGCTCTGTTGGGATGCCAAAGGCAAGGGCAATACTGATACTGAACGTAT
GCATTTTATTTATGAAATCGTAGAATTTGTTGGCCGCTGGTCAATGGTCGATGTCTTTGTTATTGCGGTGCTTTCATCAT
TAGTCCGTATTGGGCAGTTGATGAGCATCTACCCGGCGATTGGGGCACTACTGTTTGCGATGGTTGTGATCCTGACAATG
TTTTCCGCATTAACGTTTGATCCTCGTTTAACCTGGGATCGAATCAATGAAACAACTCAGAAGGAGCCGCAAGGTGACGG
ACAATAA

Upstream 100 bases:

>100_bases
CGTAATGTTGTGCTTTGTGATGATATTGTGTTTATTGTTACATTGAGTCTCTTGATAGAACGGTGTTCAGCTATAAAGGC
CTGCCGTAAGGAAATAGATA

Downstream 100 bases:

>100_bases
TCCCAGCCAGAGTGTGGCGGAAATTGAAAAAATCAAGCGATGGTCACCGGTATGGATCATCCCGATCGTCACTGCGCTGA
TCGGCGCATGGATACTGTTT

Product: PqiA family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MCAVIEPVNGGQSGSILLCQQCDMSVALPPLPYGTKAVCPRCKTTLTARWEEPRKRPIGYALSALFMLLLANLFPFVDMR
VAGITSEISLIQIPQVMLSDNYISMATLFMVLVQLIPAFCMVAIILLCLRVRMPIRWKTAMAKALFQFKTWCMVEIFLAG
VLVSFVKLMAYGEIGIGSSFIPYCLFCLLQVRAFQCIDRHWMWQDIAPAPAVPYRLIPGRTGLRQGLRSCSCCTAILPQD
QVECPRCYTHGYVRRRNSLQWTMALLVTSILLYIPANMMPIMITESLGNQMNSTIMAGVIFLWSEGSYPVALVIFIASIM
VPSLKMLAIAWLCWDAKGKGNTDTERMHFIYEIVEFVGRWSMVDVFVIAVLSSLVRIGQLMSIYPAIGALLFAMVVILTM
FSALTFDPRLTWDRINETTQKEPQGDGQ

Sequences:

>Translated_428_residues
MCAVIEPVNGGQSGSILLCQQCDMSVALPPLPYGTKAVCPRCKTTLTARWEEPRKRPIGYALSALFMLLLANLFPFVDMR
VAGITSEISLIQIPQVMLSDNYISMATLFMVLVQLIPAFCMVAIILLCLRVRMPIRWKTAMAKALFQFKTWCMVEIFLAG
VLVSFVKLMAYGEIGIGSSFIPYCLFCLLQVRAFQCIDRHWMWQDIAPAPAVPYRLIPGRTGLRQGLRSCSCCTAILPQD
QVECPRCYTHGYVRRRNSLQWTMALLVTSILLYIPANMMPIMITESLGNQMNSTIMAGVIFLWSEGSYPVALVIFIASIM
VPSLKMLAIAWLCWDAKGKGNTDTERMHFIYEIVEFVGRWSMVDVFVIAVLSSLVRIGQLMSIYPAIGALLFAMVVILTM
FSALTFDPRLTWDRINETTQKEPQGDGQ
>Mature_428_residues
MCAVIEPVNGGQSGSILLCQQCDMSVALPPLPYGTKAVCPRCKTTLTARWEEPRKRPIGYALSALFMLLLANLFPFVDMR
VAGITSEISLIQIPQVMLSDNYISMATLFMVLVQLIPAFCMVAIILLCLRVRMPIRWKTAMAKALFQFKTWCMVEIFLAG
VLVSFVKLMAYGEIGIGSSFIPYCLFCLLQVRAFQCIDRHWMWQDIAPAPAVPYRLIPGRTGLRQGLRSCSCCTAILPQD
QVECPRCYTHGYVRRRNSLQWTMALLVTSILLYIPANMMPIMITESLGNQMNSTIMAGVIFLWSEGSYPVALVIFIASIM
VPSLKMLAIAWLCWDAKGKGNTDTERMHFIYEIVEFVGRWSMVDVFVIAVLSSLVRIGQLMSIYPAIGALLFAMVVILTM
FSALTFDPRLTWDRINETTQKEPQGDGQ

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=411, Percent_Identity=69.5863746958638, Blast_Score=594, Evalue=1e-171,
Organism=Escherichia coli, GI1788137, Length=404, Percent_Identity=28.2178217821782, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 48015; Mature: 48015

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAVIEPVNGGQSGSILLCQQCDMSVALPPLPYGTKAVCPRCKTTLTARWEEPRKRPIGY
CCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHHH
ALSALFMLLLANLFPFVDMRVAGITSEISLIQIPQVMLSDNYISMATLFMVLVQLIPAFC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
MVAIILLCLRVRMPIRWKTAMAKALFQFKTWCMVEIFLAGVLVSFVKLMAYGEIGIGSSF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
IPYCLFCLLQVRAFQCIDRHWMWQDIAPAPAVPYRLIPGRTGLRQGLRSCSCCTAILPQD
HHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC
QVECPRCYTHGYVRRRNSLQWTMALLVTSILLYIPANMMPIMITESLGNQMNSTIMAGVI
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHEEEHHHCHHHHHHHHHHHH
FLWSEGSYPVALVIFIASIMVPSLKMLAIAWLCWDAKGKGNTDTERMHFIYEIVEFVGRW
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCH
SMVDVFVIAVLSSLVRIGQLMSIYPAIGALLFAMVVILTMFSALTFDPRLTWDRINETTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHC
KEPQGDGQ
CCCCCCCC
>Mature Secondary Structure
MCAVIEPVNGGQSGSILLCQQCDMSVALPPLPYGTKAVCPRCKTTLTARWEEPRKRPIGY
CCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCHHH
ALSALFMLLLANLFPFVDMRVAGITSEISLIQIPQVMLSDNYISMATLFMVLVQLIPAFC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
MVAIILLCLRVRMPIRWKTAMAKALFQFKTWCMVEIFLAGVLVSFVKLMAYGEIGIGSSF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
IPYCLFCLLQVRAFQCIDRHWMWQDIAPAPAVPYRLIPGRTGLRQGLRSCSCCTAILPQD
HHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC
QVECPRCYTHGYVRRRNSLQWTMALLVTSILLYIPANMMPIMITESLGNQMNSTIMAGVI
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHEEEHHHCHHHHHHHHHHHH
FLWSEGSYPVALVIFIASIMVPSLKMLAIAWLCWDAKGKGNTDTERMHFIYEIVEFVGRW
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCH
SMVDVFVIAVLSSLVRIGQLMSIYPAIGALLFAMVVILTMFSALTFDPRLTWDRINETTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHC
KEPQGDGQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]