| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is ycbG [C]
Identifier: 170024857
GI number: 170024857
Start: 2887625
End: 2888080
Strand: Reverse
Name: ycbG [C]
Synonym: YPK_2632
Alternate gene names: 170024857
Gene position: 2888080-2887625 (Counterclockwise)
Preceding gene: 170024860
Following gene: 170024853
Centisome position: 61.59
GC content: 44.08
Gene sequence:
>456_bases ATGAAATATCAACAGCTGGAAAATCTTGAGAGTGGTTGGAAATGGGCGTATTTGGTCAAAAAACACCGTGAAGGTGAAGC CATTACCCGCCATATTGAAAACAGTGCAGCTCAAGACGCAGTAGAGCAACTGATGAAACTGGAAAATGAACCAGTAAAAG TGCAAGAGTGGATTGACGCGCATATGAATGTCAATCTGGCGACCAGAATGAAACAGACTATTCGTGCCCGTCGTAAGCGC CACTTTAATGCCGAGCACCAGCATACGCGTAAGAAGTCGATCGACCTGGAGTTTTTGGTTTGGCAGCGATTGGCAGTATT AGCCAGACGGCGTGGTAATACGCTTTCAGATACTGTGGTTCAGTTGATTGAAGATGCTGAGCGGAAAGAGAAATATGCCA GCCAGATGTCTTCTTTGAAGCAGGACTTGAAAGATATTTTAGATAAAGAAGTTTAA
Upstream 100 bases:
>100_bases CCGTACAAAAAACAAGCTAATAATGCGCGTTTAGCAGGGTGAAATTCTGTGTAAAGCTGTTATGCTTGGCTTAAGTTACA CGGTCACTGAAGAGCTCACG
Downstream 100 bases:
>100_bases CCGGTAGCGGGTGAAACCAAGATAAGCGATTTAGTCAGCTGTTGGCTGAATCACAGGATAAATAAATATCCTCCGGCATA GCCGGAGGTTTTTCATATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENEPVKVQEWIDAHMNVNLATRMKQTIRARRKR HFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGNTLSDTVVQLIEDAERKEKYASQMSSLKQDLKDILDKEV
Sequences:
>Translated_151_residues MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENEPVKVQEWIDAHMNVNLATRMKQTIRARRKR HFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGNTLSDTVVQLIEDAERKEKYASQMSSLKQDLKDILDKEV >Mature_151_residues MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENEPVKVQEWIDAHMNVNLATRMKQTIRARRKR HFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGNTLSDTVVQLIEDAERKEKYASQMSSLKQDLKDILDKEV
Specific function: Unknown
COG id: COG3120
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0268 family
Homologues:
Organism=Escherichia coli, GI1787190, Length=150, Percent_Identity=80, Blast_Score=245, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1433_YERPE (Q8ZG78)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AB0175 - RefSeq: NP_670038.1 - RefSeq: NP_992257.1 - RefSeq: YP_002346454.1 - GeneID: 1147684 - GeneID: 1174273 - GeneID: 2765640 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO1433 - KEGG: ypk:y2737 - KEGG: ypm:YP_0877 - HOGENOM: HBG297085 - OMA: ECGWKWK - ProtClustDB: PRK05097 - BioCyc: YPES187410:Y2737-MONOMER - BioCyc: YPES214092:YPO1433-MONOMER - HAMAP: MF_01073 - InterPro: IPR009390 - ProDom: PD033720
Pfam domain/function: PF06303 DUF1047
EC number: NA
Molecular weight: Translated: 17934; Mature: 17934
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENEPVKVQEWIDA CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH HMNVNLATRMKQTIRARRKRHFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGNTLSDTVV HCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH QLIEDAERKEKYASQMSSLKQDLKDILDKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENEPVKVQEWIDA CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH HMNVNLATRMKQTIRARRKRHFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGNTLSDTVV HCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH QLIEDAERKEKYASQMSSLKQDLKDILDKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430