| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is yeiB [H]
Identifier: 170024792
GI number: 170024792
Start: 2819305
End: 2820471
Strand: Reverse
Name: yeiB [H]
Synonym: YPK_2567
Alternate gene names: 170024792
Gene position: 2820471-2819305 (Counterclockwise)
Preceding gene: 170024793
Following gene: 170024791
Centisome position: 60.15
GC content: 50.47
Gene sequence:
>1167_bases ATGCGTCAACGCATCGCAACGTTAGACAGTGCGCGGGGGCTGGCCATTCTTGGCATTCTGCTGCTTAATATTAGCGCGTT TGGTTTGCCAAAGGCCGCTTATCTCAATCCAGCTTATCTTGGTCTTCCCTCATTATCAGATATCTGGACTTGGGCGATCC TCGATATTGTCGCACAGGTAAAGTTCCTTTCTATATTTGCCATGTTATTTGGTGCAGGCCTTGAGCTGTTACTTAAGCGT GGGAAAAGTTGGGTACGTGCCCGCCTTTCTTTATTGTTACTACTGGGGTTAATTCACGGCATCTTCTTCTGGGATGGCGA TATTCTGTTGGCTTATAGTTTGATTGGTCTGGTGTGTTGGCGAATAATCCAAGATGCCAAAGATGCAGCCAGCTTATTAC GTACCGGCGCGGTACTCTATTTGATCGGTGTCGCTGTGTTGTTGTTGCTGGGCTATATTACCCGCGGAGAGCCGGGCCGT TTTTGGCTCCCTGGGCCTGCGGATCTGCAATATGAGCAATTTTGGAAGTTACAGGGTGGGGGAGAGGCTTGGCGTAATCG TCTGGGCCTGTTGTCATCCAACTTGATTGCCATTGGTGCGCAATATGGTTGGGAGTTGGCAGGCTCCATGGTATTCGGCG CTGGGTTGATGCGCTGCGGCTGGCTGCGGGGAGAATTCAGTCTGCGTCACTACCGTAGGCTCGCACTCTTTCTGATATCG CTCTCATTGGTTATCCAAATACCGGGTGTGGCACTGCAAGTGTATGTCGGTTGGGATTACCGCTGGGCGGGTTTTTTGCT ACAAGTGCCTCGAGAATTGGGGGCGCCGTTGCAGGCGGTGGGGTATCTGGCGCTGCTCTACGGGTTCTGGCCAACATTAT CCCGCTGGGCTATCAGCCATTGGCTGGCAAAGGTTGGCCGTATGGCGCTGAGTAATTATTTATTACAGACATTGATTTGT ACGCTGATTTTTTATCATTTTGGTTTATACCAACAGCTCGATCGTTTGCAACTGTTAGCCGTCGTACCACTGGTTTGGGC CTGTAATGTGATTTTTTCTCTGTTATGGTTACGCTATTTCGCGCAAGGCCCTGTGGAGTGGCTATGGCGTCGGTTAACCG CTTATGCCTGCGGCCAAGAGTTACAAATACGCAACACTAAGCTCTGA
Upstream 100 bases:
>100_bases GAATACGCGTCAGGAATTTCTGCGTGCGGTTCGTCACCACGGCTGATTGGCTTTTTGCCAGAGGGAGGGCCTGTAGGCCC TCGAATACAGGATGTCGAGT
Downstream 100 bases:
>100_bases CAGAATCAAAAGAGAAAAATGATGTTGTGAGTTGCAAATATGTATGTAAACGTTTTCTTTTTGTAACATGTGTCACGCGG CAATATCCATAAATTGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQVKFLSIFAMLFGAGLELLLKR GKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEPGR FWLPGPADLQYEQFWKLQGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALFLIS LSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISHWLAKVGRMALSNYLLQTLIC TLIFYHFGLYQQLDRLQLLAVVPLVWACNVIFSLLWLRYFAQGPVEWLWRRLTAYACGQELQIRNTKL
Sequences:
>Translated_388_residues MRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQVKFLSIFAMLFGAGLELLLKR GKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEPGR FWLPGPADLQYEQFWKLQGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALFLIS LSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISHWLAKVGRMALSNYLLQTLIC TLIFYHFGLYQQLDRLQLLAVVPLVWACNVIFSLLWLRYFAQGPVEWLWRRLTAYACGQELQIRNTKL >Mature_388_residues MRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQVKFLSIFAMLFGAGLELLLKR GKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEPGR FWLPGPADLQYEQFWKLQGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALFLIS LSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISHWLAKVGRMALSNYLLQTLIC TLIFYHFGLYQQLDRLQLLAVVPLVWACNVIFSLLWLRYFAQGPVEWLWRRLTAYACGQELQIRNTKL
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxaH and yrkO [H]
Homologues:
Organism=Escherichia coli, GI1788475, Length=380, Percent_Identity=59.7368421052632, Blast_Score=446, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 43747; Mature: 43747
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQV CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHH KFLSIFAMLFGAGLELLLKRGKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCW HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEPGRFWLPGPADLQYEQFWKLQGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHCCC GEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALFLIS HHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISH HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH WLAKVGRMALSNYLLQTLICTLIFYHFGLYQQLDRLQLLAVVPLVWACNVIFSLLWLRYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQGPVEWLWRRLTAYACGQELQIRNTKL HCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQV CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHH KFLSIFAMLFGAGLELLLKRGKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCW HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEPGRFWLPGPADLQYEQFWKLQGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHCCC GEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALFLIS HHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISH HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH WLAKVGRMALSNYLLQTLICTLIFYHFGLYQQLDRLQLLAVVPLVWACNVIFSLLWLRYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQGPVEWLWRRLTAYACGQELQIRNTKL HCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 1619663 [H]