| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is folE [H]
Identifier: 170024793
GI number: 170024793
Start: 2820526
End: 2821188
Strand: Reverse
Name: folE [H]
Synonym: YPK_2568
Alternate gene names: 170024793
Gene position: 2821188-2820526 (Counterclockwise)
Preceding gene: 170024794
Following gene: 170024792
Centisome position: 60.16
GC content: 45.25
Gene sequence:
>663_bases ATGTCATCGCTAAGTAAAGAAGCTGAGTTGGTTCATCAAGCGCTGCTGGCCCGTGGTCTTGAAACCCCTTTACGTAAACC AGAATTAGATGCCGAGACGCGCAAAACTCGGATTCAGGCCCATATGACAGAAGTCATGCATTTGCTGAATCTTGATTTAA CCGACGATAGTCTGGCTGATACACCAAGACGCATTGCGAAGATGTATGTTGATGAGATTTTCTCCGGATTGGATTACGAA AATTTCCCTAAAATCACACTGATTCAAAATAAAATGAAAGTTGATGAAATGGTAACGGTACGGGATATCACTCTGACCAG CACCTGCGAACATCATTTTGTGACGATTGATGGGAAAGCCACCGTCGCTTATATTCCGAAAGACAGTGTCATTGGTTTGT CGAAAATCAACCGTATCGTGCAGTTTTTTGCACAGCGTCCGCAAGTGCAGGAACGATTAACACAGCAGATCTTGCTCGCA TTACAAACCCTGTTGGGTACCAATAATGTCGCAGTTTCTATTGATGCAGTTCATTATTGCGTTAAAGCACGTGGTATCCG TGATGCGACCAGCGCGACGACCACCACATCATTAGGCGGGTTATTTAAATCCAGTCAGAATACGCGTCAGGAATTTCTGC GTGCGGTTCGTCACCACGGCTGA
Upstream 100 bases:
>100_bases TGGATAATCATTTCGCTCTCAATTAGAGTGAGAGCGAAATTCGGGTGTGACCCGCATCATGCTTGTCTTATCTGGATGCG TAAGCCTGTTGGAGAAAAGA
Downstream 100 bases:
>100_bases TTGGCTTTTTGCCAGAGGGAGGGCCTGTAGGCCCTCGAATACAGGATGTCGAGTATGCGTCAACGCATCGCAACGTTAGA CAGTGCGCGGGGGCTGGCCA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLADTPRRIAKMYVDEIFSGLDYE NFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILLA LQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG
Sequences:
>Translated_220_residues MSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLADTPRRIAKMYVDEIFSGLDYE NFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILLA LQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG >Mature_219_residues SSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLADTPRRIAKMYVDEIFSGLDYEN FPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILLAL QTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=123, Percent_Identity=44.7154471544715, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI4503949, Length=123, Percent_Identity=44.7154471544715, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI66932970, Length=82, Percent_Identity=48.780487804878, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI66932972, Length=82, Percent_Identity=48.780487804878, Blast_Score=86, Evalue=2e-17, Organism=Escherichia coli, GI1788476, Length=222, Percent_Identity=89.1891891891892, Blast_Score=389, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17560486, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=40.1098901098901, Blast_Score=127, Evalue=1e-30, Organism=Drosophila melanogaster, GI24656796, Length=122, Percent_Identity=45.0819672131148, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI24656782, Length=122, Percent_Identity=45.0819672131148, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI24656791, Length=122, Percent_Identity=45.0819672131148, Blast_Score=110, Evalue=7e-25,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 24715; Mature: 24584
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLAD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TPRRIAKMYVDEIFSGLDYENFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKA HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHEEEECCCCCEEEEECCCE TVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILLALQTLLGTNNVAVSIDAVHYC EEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH VKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG HHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure SSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLAD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TPRRIAKMYVDEIFSGLDYENFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKA HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHEEEECCCCCEEEEECCCE TVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILLALQTLLGTNNVAVSIDAVHYC EEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH VKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG HHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA