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The map label for this gene is yiiZ [H]

Identifier: 170024721

GI number: 170024721

Start: 2729478

End: 2730470

Strand: Direct

Name: yiiZ [H]

Synonym: YPK_2496

Alternate gene names: 170024721

Gene position: 2729478-2730470 (Clockwise)

Preceding gene: 170024719

Following gene: 170024722

Centisome position: 58.2

GC content: 44.31

Gene sequence:

>993_bases
ATGAGATTGCCAACGTCTTTCCCTACATTATGTTTAACCGCCTCGGCGTTGTTACTGAGCCAAGTGCTATTTAGCCAATC
CGCAACTGCCCAACAAATTAAAGCAGCCGATGTTCATCCTAAAGATTATCCCAATGTCGTGGCGATGAAAGATATGGGCG
AAAAACTAAAAGTCGCGACTGATGGCCGTCTGGAGATGAAAACATTTCCTGGTGGAGTGTTAGGTGATGAGAAGCAAATG
ATAGAACAGGCGCAAATGGGCGCAATCGATATTATTCGTGTTTCTATGACACCCGTTGCCTCTATTTTACCGGAGATTAA
TGTCTTTACCCTTCCCTATATCTTCCGTGACGAAGATCATTTACATAAGGTCCTTGATGGTAAAATTGGTCAGGAAATAG
GCGGTAAAATCACCGATAACAAAAATTCAAAATTGGTGTTCTTAGGTTGGATGGATGGCGGTACCCGTCACCTGATTACT
AAACAACCGGTGATTAAACCGGAAGATCTCAGCGGGATGAAAATCCGTGTTCAAGGCAGCCCGATTGCGTTAGCAACGCT
AAAATCAATGGGGGCCAATGCCCTGAGTATGGGCGTCAGTGAAGTGTTCAGCGGTATGCAAACCGGGGTCATTGATGGCA
CCGAAAATAACCAGCCTACATTTGTAGCCCATAATTACCTGCCTGTTGTCAAAAATTATACCCTGAGCGGCCATTTCATT
ATTCCCGAAGTATTCCTGTATTCGAAAGCCAAGTGGGACAAATTATCTGCCGAAGATCAGCAAACCATTCTTAAATTAGC
AAAAGAAGCACAAGCTGAGCAACGCGTATTATGGACAGCCTATGAGCAACAAGCTCATGAGAAAATGAAGGCCGGCGGTG
TGCAGTATCATGAGATTGATCGTGATTATTATTATAAAGCCACTCAGCCCGTACGCGATGAGTTCGGCAAAGGTCATGAG
GACTTGATTAAACAGATTGGTGACGTCCAATAA

Upstream 100 bases:

>100_bases
GGGTCCCGATGAGTTCACTTAGGTAAGTGGCCCAGACGAGAGTCGATAACACCGCTGCAACTTCAAATATGAAGGGTATT
CTACCTCTGGAGATCATTGA

Downstream 100 bases:

>100_bases
CATCCATCCGGCGGTATTGAATTATTTTTAATACCGCTGATATTACCCAACGCCATTGCCGTTGCAATAAGGCTGCTAAC
GCCACTGCAACGCCAAGGAC

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRLPTSFPTLCLTASALLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGDEKQM
IEQAQMGAIDIIRVSMTPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLIT
KQPVIKPEDLSGMKIRVQGSPIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFI
IPEVFLYSKAKWDKLSAEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFGKGHE
DLIKQIGDVQ

Sequences:

>Translated_330_residues
MRLPTSFPTLCLTASALLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGDEKQM
IEQAQMGAIDIIRVSMTPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLIT
KQPVIKPEDLSGMKIRVQGSPIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFI
IPEVFLYSKAKWDKLSAEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFGKGHE
DLIKQIGDVQ
>Mature_330_residues
MRLPTSFPTLCLTASALLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGDEKQM
IEQAQMGAIDIIRVSMTPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLIT
KQPVIKPEDLSGMKIRVQGSPIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFI
IPEVFLYSKAKWDKLSAEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFGKGHE
DLIKQIGDVQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=290, Percent_Identity=33.448275862069, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36607; Mature: 36607

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPTSFPTLCLTASALLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVAT
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEC
DGRLEMKTFPGGVLGDEKQMIEQAQMGAIDIIRVSMTPVASILPEINVFTLPYIFRDEDH
CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEECEEECCHHH
LHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLITKQPVIKPEDLSGMKIRVQGS
HHHHHCCHHHHHHCCEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEECCC
PIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFI
CEEEHHHHHCCCHHHHHHHHHHHCCHHHCEECCCCCCCCEEEEECCEEHHHCEEECCEEE
IPEVFLYSKAKWDKLSAEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEID
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
RDYYYKATQPVRDEFGKGHEDLIKQIGDVQ
CCCEEECCCCHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRLPTSFPTLCLTASALLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVAT
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEC
DGRLEMKTFPGGVLGDEKQMIEQAQMGAIDIIRVSMTPVASILPEINVFTLPYIFRDEDH
CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEECEEECCHHH
LHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLITKQPVIKPEDLSGMKIRVQGS
HHHHHCCHHHHHHCCEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEECCC
PIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFI
CEEEHHHHHCCCHHHHHHHHHHHCCHHHCEECCCCCCCCEEEEECCEEHHHCEEECCEEE
IPEVFLYSKAKWDKLSAEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEID
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
RDYYYKATQPVRDEFGKGHEDLIKQIGDVQ
CCCEEECCCCHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]