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The map label for this gene is 170024722

Identifier: 170024722

GI number: 170024722

Start: 2730594

End: 2731100

Strand: Direct

Name: 170024722

Synonym: YPK_2497

Alternate gene names: NA

Gene position: 2730594-2731100 (Clockwise)

Preceding gene: 170024721

Following gene: 170024723

Centisome position: 58.23

GC content: 46.35

Gene sequence:

>507_bases
ATGGCTCGTTATTATCTCTCTGCGATGGATGTTTTATACCGCCTATCAATCTGGGTAGCCGGTATCGCTTTAATTATTAT
GGTTGCCGCTATCCCTATCGGTATATTTGCCCGTTATATTCAAAACGACGGCTTATCTTGGCCAGAACCCGTCGCTATTT
TATGTATGGTGACGTTCACCTTTATTGGCGCAGCGGCCAGTTATCGCTCTGGTTCTCATATTGCCGTGAGCATGGTAACC
GATAGAATTCCCGAGGCGGGTAAGAAGATCTGTGCGTTGCTGGTTAATTTGCTGATGGTGATGATAAGTCTATTTATTCT
GAGCTACAGCTATATTCTGTGCAGCGAATTATGGTCGCAACCCGTCGCCGAGTTCCCATTATTGACCGCCGGACAAACCT
ATCTTCCTTTACCTGTCGGTTCTGCTATTACCCTGATGTTTATTATCGAGCGCCTATTTTTTGGCCCGCAAACCCAGCGC
CCGGTAGTGATGATCGGCAATTCATAA

Upstream 100 bases:

>100_bases
ATTTTTAATACCGCTGATATTACCCAACGCCATTGCCGTTGCAATAAGGCTGCTAACGCCACTGCAACGCCAAGGACAAA
GGGATACTGAGGTTTCCACT

Downstream 100 bases:

>100_bases
TTTTGGGGAACTCTGCCTTATGGACGCATTTATTTTAGTTTTTACCCTGGCAATTCTATTGGCTATTGGTGTCCCCGTTG
CCTATGCCGTGGGCCTCAGT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: C4-Dicarboxylate Transporter Small Subunit; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter Small Permease Protein DctQ; TRAP Family C4-Dicarboxylate Transmembrane Transporter; TRAP Dicarboxylate Transporter DctQ Sununit; C4-Dicarboxylate Transport Small Permease Component; TRAP Dicarboxylate Transporter DctQ Subunit

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MARYYLSAMDVLYRLSIWVAGIALIIMVAAIPIGIFARYIQNDGLSWPEPVAILCMVTFTFIGAAASYRSGSHIAVSMVT
DRIPEAGKKICALLVNLLMVMISLFILSYSYILCSELWSQPVAEFPLLTAGQTYLPLPVGSAITLMFIIERLFFGPQTQR
PVVMIGNS

Sequences:

>Translated_168_residues
MARYYLSAMDVLYRLSIWVAGIALIIMVAAIPIGIFARYIQNDGLSWPEPVAILCMVTFTFIGAAASYRSGSHIAVSMVT
DRIPEAGKKICALLVNLLMVMISLFILSYSYILCSELWSQPVAEFPLLTAGQTYLPLPVGSAITLMFIIERLFFGPQTQR
PVVMIGNS
>Mature_167_residues
ARYYLSAMDVLYRLSIWVAGIALIIMVAAIPIGIFARYIQNDGLSWPEPVAILCMVTFTFIGAAASYRSGSHIAVSMVTD
RIPEAGKKICALLVNLLMVMISLFILSYSYILCSELWSQPVAEFPLLTAGQTYLPLPVGSAITLMFIIERLFFGPQTQRP
VVMIGNS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18502; Mature: 18371

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYYLSAMDVLYRLSIWVAGIALIIMVAAIPIGIFARYIQNDGLSWPEPVAILCMVTFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FIGAAASYRSGSHIAVSMVTDRIPEAGKKICALLVNLLMVMISLFILSYSYILCSELWSQ
HHHHHHHCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVAEFPLLTAGQTYLPLPVGSAITLMFIIERLFFGPQTQRPVVMIGNS
HHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC
>Mature Secondary Structure 
ARYYLSAMDVLYRLSIWVAGIALIIMVAAIPIGIFARYIQNDGLSWPEPVAILCMVTFT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FIGAAASYRSGSHIAVSMVTDRIPEAGKKICALLVNLLMVMISLFILSYSYILCSELWSQ
HHHHHHHCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVAEFPLLTAGQTYLPLPVGSAITLMFIIERLFFGPQTQRPVVMIGNS
HHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA