Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is yobH [H]
Identifier: 170024706
GI number: 170024706
Start: 2715693
End: 2715926
Strand: Direct
Name: yobH [H]
Synonym: YPK_2481
Alternate gene names: 170024706
Gene position: 2715693-2715926 (Clockwise)
Preceding gene: 170024701
Following gene: 170024709
Centisome position: 57.91
GC content: 42.31
Gene sequence:
>234_bases ATGAGTTTATTCAGATTGTTTTTGGTGGCTGCGATCGTATACCTAGGGCTGCTATTTTCTGGCTACGGCGTGCTGATTGG CAGTGAAAAAAACGCCGCTGGTTTAGGTTTACAGTGCAAATATCTAACCGCCAGAAATATCGCCAACGCTCAATATATAA ATGGTGAGAACGGCATCATAGGGATCAGCAGTTGCCCATTAGTAAAAAAAATCGGCAACAATGTCTTTGAATGA
Upstream 100 bases:
>100_bases AACATTTAGGATTTTTACCATTCACTAACTCAGCATAACAAATTAAACTGTTCAGTCTATTTTCTTAAAAAAGATTTAAC TTATTCTCTGGGGCGATAAC
Downstream 100 bases:
>100_bases TTCATCAACTGATTGAGCAAAATAAGTTCTCTCTCTTTTCAGCCATGTGGTCATCATGCTTCACAGTGTGATATTTTCTT ATCGATCACGCTATTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSLFRLFLVAAIVYLGLLFSGYGVLIGSEKNAAGLGLQCKYLTARNIANAQYINGENGIIGISSCPLVKKIGNNVFE
Sequences:
>Translated_77_residues MSLFRLFLVAAIVYLGLLFSGYGVLIGSEKNAAGLGLQCKYLTARNIANAQYINGENGIIGISSCPLVKKIGNNVFE >Mature_76_residues SLFRLFLVAAIVYLGLLFSGYGVLIGSEKNAAGLGLQCKYLTARNIANAQYINGENGIIGISSCPLVKKIGNNVFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081982, Length=68, Percent_Identity=55.8823529411765, Blast_Score=88, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8212; Mature: 8081
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFRLFLVAAIVYLGLLFSGYGVLIGSEKNAAGLGLQCKYLTARNIANAQYINGENGII CHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCEE GISSCPLVKKIGNNVFE ECCCCCHHHHHCCCCCC >Mature Secondary Structure SLFRLFLVAAIVYLGLLFSGYGVLIGSEKNAAGLGLQCKYLTARNIANAQYINGENGII HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCEE GISSCPLVKKIGNNVFE ECCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA