| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170024561
Identifier: 170024561
GI number: 170024561
Start: 2573019
End: 2573486
Strand: Direct
Name: 170024561
Synonym: YPK_2336
Alternate gene names: NA
Gene position: 2573019-2573486 (Clockwise)
Preceding gene: 170024560
Following gene: 170024562
Centisome position: 54.87
GC content: 45.3
Gene sequence:
>468_bases ATGCTAAAGCCTGATTCGCTGCGTACCGCCATTTTAAAGGCGGTGCCGTATATCAAGCAAAACCCAGACTGCTTACATGT CTTTATCGATAAAGGGGCGATTATTGCCACGCTGGCCCCGTCACTCTCTTTTGAGTATCAGTACACCTTAAATCTGGTGG TGACTGATTACGCCAGTGATATGGATCTGGTCATTGTCCCGGTCTTGCATTGGTTGCGCACTCATCAGCCAGATATTATG GCGAACCCCGACAAACGTCAGGACAGTTTTACTTTTGAAGTTGATTATCTGGATAACAAAGTGCGCGATATCAGCATTGA TATCAAACTCACCGAACGGGTGATCGTTAAAGAGAAAAATGGCAAATTAAGCGTTACTCATCTTGGGGAACCGGTGCCAC CAGAGCATTTTATCAACAGCTATCAAATTGATATTGAGGGTAAAACTGTCGCGGAGTGGGTAACGTGA
Upstream 100 bases:
>100_bases AACGGTGATTTAAACGACGATATTGATCGCCTTGAGGCCGCATTGCACGCTTGCGCGGCACAGGTCGATACCGTCTTTAT TTGCCAGCAAGGGGCCGCTG
Downstream 100 bases:
>100_bases ATAACTTGCATGAGCTAGATCAGACCTTATCAACATTATTGGCACAATTGGCCCCACAGGCGCGCGGCGCGTTTATGCGT CAGGTCGCTAAAGAACTACG
Product: P2 phage tail completion R family protein
Products: NA
Alternate protein names: Tail Completion Protein R; P2 Phage Tail Completion Protein R; Phage Tail Completion Protein R; Phage Tail Protein; Bacteriophage Tail Completion Protein R; Bacteriophage P2 Tail Completion Protein GPR; Phage-Related Tail Completion Protein; Tail Completion Protein; Bacteriophage Tail Completion Protein GpR-Like Protein; Phage-Related Tail Protein; P2 Phage Tail Completion Protein R GpR; Prophage Tail Completion Protein; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein; Phage Tail Completion Protein GpR; Phage Tail Completion R Family Protein; Bacteriophage P2 Tail Completion Protein GpR
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLKPDSLRTAILKAVPYIKQNPDCLHVFIDKGAIIATLAPSLSFEYQYTLNLVVTDYASDMDLVIVPVLHWLRTHQPDIM ANPDKRQDSFTFEVDYLDNKVRDISIDIKLTERVIVKEKNGKLSVTHLGEPVPPEHFINSYQIDIEGKTVAEWVT
Sequences:
>Translated_155_residues MLKPDSLRTAILKAVPYIKQNPDCLHVFIDKGAIIATLAPSLSFEYQYTLNLVVTDYASDMDLVIVPVLHWLRTHQPDIM ANPDKRQDSFTFEVDYLDNKVRDISIDIKLTERVIVKEKNGKLSVTHLGEPVPPEHFINSYQIDIEGKTVAEWVT >Mature_155_residues MLKPDSLRTAILKAVPYIKQNPDCLHVFIDKGAIIATLAPSLSFEYQYTLNLVVTDYASDMDLVIVPVLHWLRTHQPDIM ANPDKRQDSFTFEVDYLDNKVRDISIDIKLTERVIVKEKNGKLSVTHLGEPVPPEHFINSYQIDIEGKTVAEWVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17693; Mature: 17693
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPDSLRTAILKAVPYIKQNPDCLHVFIDKGAIIATLAPSLSFEYQYTLNLVVTDYASD CCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEEEEEEEEECCCC MDLVIVPVLHWLRTHQPDIMANPDKRQDSFTFEVDYLDNKVRDISIDIKLTERVIVKEKN CCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEEEEEEEEEEEEEECC GKLSVTHLGEPVPPEHFINSYQIDIEGKTVAEWVT CEEEEEECCCCCCHHHCCCEEEEEECCCEEEEECC >Mature Secondary Structure MLKPDSLRTAILKAVPYIKQNPDCLHVFIDKGAIIATLAPSLSFEYQYTLNLVVTDYASD CCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEEEEEEEEECCCC MDLVIVPVLHWLRTHQPDIMANPDKRQDSFTFEVDYLDNKVRDISIDIKLTERVIVKEKN CCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEEEEEEEEEEEEEECC GKLSVTHLGEPVPPEHFINSYQIDIEGKTVAEWVT CEEEEEECCCCCCHHHCCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA