| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024562
Identifier: 170024562
GI number: 170024562
Start: 2573483
End: 2573929
Strand: Direct
Name: 170024562
Synonym: YPK_2337
Alternate gene names: NA
Gene position: 2573483-2573929 (Clockwise)
Preceding gene: 170024561
Following gene: 170024564
Centisome position: 54.88
GC content: 50.78
Gene sequence:
>447_bases GTGAATAACTTGCATGAGCTAGATCAGACCTTATCAACATTATTGGCACAATTGGCCCCACAGGCGCGCGGCGCGTTTAT GCGTCAGGTCGCTAAAGAACTACGGCGACGCCAACAAAAGCACATTCAGGCGCAACAGAACCCGGATGGCTCACCCTTTG TTCCGCGTAAGAAAAAGCGCCGCGATAAGCAAGGCCGCATCAAACGCAAGATGTTTACCAAACTGCGCACCGCTCGTTAT ATCAAAAACGAATCCAACGCCGACGAGGCCGCTGTTGCGTTCAGCGGCAAGGTCAATAATATGGTTAGAGTCCATCATTA CGGTTTGCGGGATAAAGTTACAAAGAACGGGCCAACAGTGAAATACGAACGCCGCCAGTTGTTAGGCTTTACTGACGGCG ATAGTGAGTGGATTGGGGATCTGGCGTTGGAGTGGCTTGCTAAGTAA
Upstream 100 bases:
>100_bases AATTAAGCGTTACTCATCTTGGGGAACCGGTGCCACCAGAGCATTTTATCAACAGCTATCAAATTGATATTGAGGGTAAA ACTGTCGCGGAGTGGGTAAC
Downstream 100 bases:
>100_bases TTATTATCTATAAGTAATTTATTTTTTTATTATATAAAAAATCACTTTCGTAATTACATATGAAAGAATAAAAGCGAGGA TGCCCATTTCATAAAATAGT
Product: phage virion morphogenesis protein
Products: NA
Alternate protein names: Tail Completion Protein S; Phage Tail Protein; Phage-Related Tail Protein; Phage Tail Completion Protein; Prophage Tail Completion Protein; Phage-Related Tail Completion Protein; P2 Phage Tail Completion Protein R; Bacteriophage Tail Synthesis Protein S; Phage Virion Morphogenesis Family; Bacteriophage P2 Tail Completion Protein GPS; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein; Phage P2 Essential Tail Completion GpS-Like Protein; Bacteriophage Tail Completion Protein GpS-Like Protein
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNNLHELDQTLSTLLAQLAPQARGAFMRQVAKELRRRQQKHIQAQQNPDGSPFVPRKKKRRDKQGRIKRKMFTKLRTARY IKNESNADEAAVAFSGKVNNMVRVHHYGLRDKVTKNGPTVKYERRQLLGFTDGDSEWIGDLALEWLAK
Sequences:
>Translated_148_residues MNNLHELDQTLSTLLAQLAPQARGAFMRQVAKELRRRQQKHIQAQQNPDGSPFVPRKKKRRDKQGRIKRKMFTKLRTARY IKNESNADEAAVAFSGKVNNMVRVHHYGLRDKVTKNGPTVKYERRQLLGFTDGDSEWIGDLALEWLAK >Mature_148_residues MNNLHELDQTLSTLLAQLAPQARGAFMRQVAKELRRRQQKHIQAQQNPDGSPFVPRKKKRRDKQGRIKRKMFTKLRTARY IKNESNADEAAVAFSGKVNNMVRVHHYGLRDKVTKNGPTVKYERRQLLGFTDGDSEWIGDLALEWLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17154; Mature: 17154
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLHELDQTLSTLLAQLAPQARGAFMRQVAKELRRRQQKHIQAQQNPDGSPFVPRKKKR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH RDKQGRIKRKMFTKLRTARYIKNESNADEAAVAFSGKVNNMVRVHHYGLRDKVTKNGPTV CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCC KYERRQLLGFTDGDSEWIGDLALEWLAK CHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNNLHELDQTLSTLLAQLAPQARGAFMRQVAKELRRRQQKHIQAQQNPDGSPFVPRKKKR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH RDKQGRIKRKMFTKLRTARYIKNESNADEAAVAFSGKVNNMVRVHHYGLRDKVTKNGPTV CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCC KYERRQLLGFTDGDSEWIGDLALEWLAK CHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA