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The map label for this gene is ybjZ [C]

Identifier: 170024476

GI number: 170024476

Start: 2493369

End: 2494550

Strand: Reverse

Name: ybjZ [C]

Synonym: YPK_2247

Alternate gene names: 170024476

Gene position: 2494550-2493369 (Counterclockwise)

Preceding gene: 170024477

Following gene: 170024475

Centisome position: 53.2

GC content: 49.07

Gene sequence:

>1182_bases
ATGGCCGGTAATCATCATAAAGGCAATGATGGCATGAAAGGCAATGATGGTATGAAAGGCAATGATAGTATGTTTTGGCG
GTTGGTGCTGCGTGCGCTTCGTTTACGTATGCAACGTGTCAGTGTCGTCTTTGCCGCACTGACCGTTGGCGCGGCGATTG
TTACCGCAATGTCGGCAGTCTATTTCGATATTAATGCCAAAATGAGTCAGGAATTACGGACATTCGGCGCTAATTTTTAT
ATTGGCCCAGGCCAGGGTAGTACCTTTGAACAGCAGACTTTTCAACCCATTATTGATTCCGCGCCGAAAGGTCTGATTAA
TGCTTCCAGTCCCTATATTTATGGTATGGCTCGTACCGAGCTGGAAAAAGTGGTTTTGATGGGCGTCTGGTTTGAATCCT
TGCAACAGTTAGTCCCCTATTGGCAGGTAACCGGCAATTGGATCGGGGTCAGTTTTGATGATCGCAATGCGATGATCGGT
GCCAAACTGGCGGAACGTTTGCATGTCAATGTAGGCGATACCCTAACATTGGTGGGCGAAGGGACCCGCCAACGCTTACA
AATAAAAGGTATTGTTGAAGCAGGTGACGCGACCGATAACATGTTGATCGTCAATTTGGAGCTGGCGCAAAAGTGGCTCA
ATCAACCTGAGCGGATCAGTAATGCATTACTGAGTGTCAGCAATGATGTTGGGCAGGTAGAAACCTTTGCCAGTCATCTA
CGCGAACAATATCCAGATCTGGAAATTCGCCCAATTCGCAAAGTATCTGCCTCTGAGGGGCAGGTTCTTGACAAGATAAA
AGGGTTGATGGGGCTGGTCTCGGTGGTCATCCTCATTCTCTCCTCTCTGTGTGTCAATACCACGTTGATGGCGATAGTGG
GTGAACGTTCGAAAGAGTTTGCGTTGCAAAAAGCACTGGGTGCCAGTGGGCGTGACATTATCCGCCAAATGTTGACTGAA
ACGATGATTATTTCGCTAGCCGCCGCGGTCTGTGGTGCTGTGTTAGGGTATTTGCTGGCTCAGGTCTTGGGGCAGGCGGT
GTTCAGTGCGGCAATTACATTGCGTGCACCGGTATTGCCGCTAACCTTGGTGCTTTCGTTGTTTGTTGCCGCTGTGGCGG
CGATTGTTCCCACCCGACGGGCTATTCATATTGAACCCGCTAAAGTTCTTAAAGGAGAGTAG

Upstream 100 bases:

>100_bases
GTCGTGCCTTGTGTACTGGTGCTATCGGTATTGATAGCCGTGTTTGGCACCTGGTTCCCCGCTCGTCGTATTACTCGCCT
CTACCCGGTGGAGGTGCTAT

Downstream 100 bases:

>100_bases
CGAATGACCTCGTCAATCATAGGGATGAAACCTGAACATCTGACTGATGCCGTTATTGAAACCCGACATTTGTATAAGCG
CTTTGGTCAAGTTACGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Permease Protein; Efflux ABC Transporter Permease; Lipoprotein ABC Transporter Permease; ABC Efflux Pump Inner Membrane Subunit; Integral Membrane Protein; Permease Domain-Containing Protein; Efflux ABC Transporter Permease Protein; ABC Transporter; Outer Membrane Protein Putative Permease; Integral Membrane Protein Putative Permease; Integral Membrane Protein-Permease Component; Hydrogenase 4 Membrane Subunit; ABC-Type Transport System Permease Component

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MAGNHHKGNDGMKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFY
IGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIG
AKLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHL
REQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTE
TMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE

Sequences:

>Translated_393_residues
MAGNHHKGNDGMKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFY
IGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIG
AKLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHL
REQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTE
TMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE
>Mature_392_residues
AGNHHKGNDGMKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFYI
GPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGA
KLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLR
EQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTET
MIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42650; Mature: 42518

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNHHKGNDGMKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFDINAKMSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTE
HEECCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHH
LEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGE
HHHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
GTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHL
CCHHEEEEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
REQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEF
HHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ALQKALGASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE
HHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCC
>Mature Secondary Structure 
AGNHHKGNDGMKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFDINAKMSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTE
HEECCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHH
LEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGE
HHHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
GTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHL
CCHHEEEEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
REQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEF
HHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ALQKALGASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE
HHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA