Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 170024477

GI number: 170024477

Start: 2494540

End: 2495832

Strand: Reverse

Name: ybjZ [C]

Synonym: YPK_2248

Alternate gene names: 170024477

Gene position: 2495832-2494540 (Counterclockwise)

Preceding gene: 170024478

Following gene: 170024476

Centisome position: 53.22

GC content: 52.82

Gene sequence:

>1293_bases
ATGTTATGGCTGATGCTGAAGCAATCGTGGTTTAGAAACGTTCGGCGTAAATCGCTGGCGGTATTTACGGTGTTTCTTGC
CGCCGGGCTTATCTCTTCACTGCTGGCTGTCTCGATCGATATTGGCGATAAAATGTCCCGTGAGCTTAAGTCATACGGGG
CCAATATATTGATAGAACCGGCCGGTCAGGTCGCACTGCCGTCGCTGTTTGGCGAGCGAAGCAATCCACTGGCTGGGCAG
GATTTTCTTGACCAAGCTGAACTCCCCAATATCAAAGACATCTTTTGGCGTAACAATATTGTTGGTTTTGCCCCGTTACT
CAGTGGTGAAGTCGACGTAAATGGCCATCTTATCTCACTGCTGGGTACCTATTTTAATCAACCTGTTGATGTCCCCGATG
AAGAGAATTATCACACGGGTCAGCAGATAATCAGCCCATATTGGCAAGTGGCGGGTGATTGGCCGCAAGAGCCGGTTAAG
GCTGGGGCCACGGAGGTTCAGGCGCTGTTGGGTAAGCAGTTGGCGCAACAAACGGGTTGGAAGGTGGGTGATGTGCTGCC
TCTTAAAGGTGCATCAGGGCCGTTGACGGTGAAAATCAGTGGTGTGTTGAGCAGTGGCGGTGAAGAAGAAGGGCGCTTGG
TTCTGCCATTAGCCGCCGTGCAATCTCTGCTCGGATTACCTGGAAAGGTCCAGGCGGTGCGGGTGTCGGCACTGACGGTG
CCGGAAAATGAGCTATCACGTAAGGCGCGGGATAATCTTGAAGCGCTTAATGCCGAAGAATACGATCTCTGGTATTGCAC
TGCTTATGTGTCGTCAATTGCCCATCAATTAGAAGAGGCGATATCCGGCTCTGTGGTGCGGCCTATCTGGCAAGTCGCCG
CGTCAGAAGGCGTGGTGATCGAGAAAATACAACTGTTGCTGGCGGTAGTCACGTTGGCGGCTTTGATCGCCGCGGCGATG
GGTATCGCATCATTGATGACCAGTACCATTATGGAGCGGGCAAAAGAGATTGGTTTAATGAAGGCACTGGGCGCTCGTCA
GTGGCAAATTTTAATGCTGTTTTATCTTGAAGCCGCTATTAGTGGTCTGATGGGGGGGGTGGCCGGGTGTCTGGCTGGCT
GGGGGTTAGCCAAAACCATTGGGCTGATGCTATTCGGTGCGCCGATCAGTTTCGCCTGGATGGTCGTGCCTTGTGTACTG
GTGCTATCGGTATTGATAGCCGTGTTTGGCACCTGGTTCCCCGCTCGTCGTATTACTCGCCTCTACCCGGTGGAGGTGCT
ATATGGCCGGTAA

Upstream 100 bases:

>100_bases
AGGCGAATTACAACCGTTTCCGCGATCACCCAGAACAGTTTGTCACGCCGGTAGCCGGCGAAGGTGATGCCAGCGATGAT
AGACAGGAGAACCCATAATT

Downstream 100 bases:

>100_bases
TCATCATAAAGGCAATGATGGCATGAAAGGCAATGATGGTATGAAAGGCAATGATAGTATGTTTTGGCGGTTGGTGCTGC
GTGCGCTTCGTTTACGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLWLMLKQSWFRNVRRKSLAVFTVFLAAGLISSLLAVSIDIGDKMSRELKSYGANILIEPAGQVALPSLFGERSNPLAGQ
DFLDQAELPNIKDIFWRNNIVGFAPLLSGEVDVNGHLISLLGTYFNQPVDVPDEENYHTGQQIISPYWQVAGDWPQEPVK
AGATEVQALLGKQLAQQTGWKVGDVLPLKGASGPLTVKISGVLSSGGEEEGRLVLPLAAVQSLLGLPGKVQAVRVSALTV
PENELSRKARDNLEALNAEEYDLWYCTAYVSSIAHQLEEAISGSVVRPIWQVAASEGVVIEKIQLLLAVVTLAALIAAAM
GIASLMTSTIMERAKEIGLMKALGARQWQILMLFYLEAAISGLMGGVAGCLAGWGLAKTIGLMLFGAPISFAWMVVPCVL
VLSVLIAVFGTWFPARRITRLYPVEVLYGR

Sequences:

>Translated_430_residues
MLWLMLKQSWFRNVRRKSLAVFTVFLAAGLISSLLAVSIDIGDKMSRELKSYGANILIEPAGQVALPSLFGERSNPLAGQ
DFLDQAELPNIKDIFWRNNIVGFAPLLSGEVDVNGHLISLLGTYFNQPVDVPDEENYHTGQQIISPYWQVAGDWPQEPVK
AGATEVQALLGKQLAQQTGWKVGDVLPLKGASGPLTVKISGVLSSGGEEEGRLVLPLAAVQSLLGLPGKVQAVRVSALTV
PENELSRKARDNLEALNAEEYDLWYCTAYVSSIAHQLEEAISGSVVRPIWQVAASEGVVIEKIQLLLAVVTLAALIAAAM
GIASLMTSTIMERAKEIGLMKALGARQWQILMLFYLEAAISGLMGGVAGCLAGWGLAKTIGLMLFGAPISFAWMVVPCVL
VLSVLIAVFGTWFPARRITRLYPVEVLYGR
>Mature_430_residues
MLWLMLKQSWFRNVRRKSLAVFTVFLAAGLISSLLAVSIDIGDKMSRELKSYGANILIEPAGQVALPSLFGERSNPLAGQ
DFLDQAELPNIKDIFWRNNIVGFAPLLSGEVDVNGHLISLLGTYFNQPVDVPDEENYHTGQQIISPYWQVAGDWPQEPVK
AGATEVQALLGKQLAQQTGWKVGDVLPLKGASGPLTVKISGVLSSGGEEEGRLVLPLAAVQSLLGLPGKVQAVRVSALTV
PENELSRKARDNLEALNAEEYDLWYCTAYVSSIAHQLEEAISGSVVRPIWQVAASEGVVIEKIQLLLAVVTLAALIAAAM
GIASLMTSTIMERAKEIGLMKALGARQWQILMLFYLEAAISGLMGGVAGCLAGWGLAKTIGLMLFGAPISFAWMVVPCVL
VLSVLIAVFGTWFPARRITRLYPVEVLYGR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=125, Percent_Identity=32.8, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 46468; Mature: 46468

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWLMLKQSWFRNVRRKSLAVFTVFLAAGLISSLLAVSIDIGDKMSRELKSYGANILIEP
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECC
AGQVALPSLFGERSNPLAGQDFLDQAELPNIKDIFWRNNIVGFAPLLSGEVDVNGHLISL
CCCCHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEHHHHCCCCCCCHHHHHH
LGTYFNQPVDVPDEENYHTGQQIISPYWQVAGDWPQEPVKAGATEVQALLGKQLAQQTGW
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCC
KVGDVLPLKGASGPLTVKISGVLSSGGEEEGRLVLPLAAVQSLLGLPGKVQAVRVSALTV
CCCCEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHHHHCCCCCEEEEEEEEEEC
PENELSRKARDNLEALNAEEYDLWYCTAYVSSIAHQLEEAISGSVVRPIWQVAASEGVVI
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHH
EKIQLLLAVVTLAALIAAAMGIASLMTSTIMERAKEIGLMKALGARQWQILMLFYLEAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SGLMGGVAGCLAGWGLAKTIGLMLFGAPISFAWMVVPCVLVLSVLIAVFGTWFPARRITR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LYPVEVLYGR
HCCHHEECCC
>Mature Secondary Structure
MLWLMLKQSWFRNVRRKSLAVFTVFLAAGLISSLLAVSIDIGDKMSRELKSYGANILIEP
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECC
AGQVALPSLFGERSNPLAGQDFLDQAELPNIKDIFWRNNIVGFAPLLSGEVDVNGHLISL
CCCCHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEHHHHCCCCCCCHHHHHH
LGTYFNQPVDVPDEENYHTGQQIISPYWQVAGDWPQEPVKAGATEVQALLGKQLAQQTGW
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCC
KVGDVLPLKGASGPLTVKISGVLSSGGEEEGRLVLPLAAVQSLLGLPGKVQAVRVSALTV
CCCCEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHHHHCCCCCEEEEEEEEEEC
PENELSRKARDNLEALNAEEYDLWYCTAYVSSIAHQLEEAISGSVVRPIWQVAASEGVVI
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHH
EKIQLLLAVVTLAALIAAAMGIASLMTSTIMERAKEIGLMKALGARQWQILMLFYLEAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SGLMGGVAGCLAGWGLAKTIGLMLFGAPISFAWMVVPCVLVLSVLIAVFGTWFPARRITR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LYPVEVLYGR
HCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]