| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is phoH [H]
Identifier: 170024464
GI number: 170024464
Start: 2479711
End: 2480499
Strand: Reverse
Name: phoH [H]
Synonym: YPK_2235
Alternate gene names: 170024464
Gene position: 2480499-2479711 (Counterclockwise)
Preceding gene: 170024465
Following gene: 170024460
Centisome position: 52.9
GC content: 48.67
Gene sequence:
>789_bases ATGGGAAGACAGAAAGCAGTGATCAAAGCTCGTCGTGAAGCGAAACGCGTGATTAGACGTGATTCACGTAGTCATCGTCA ACGTGAGGAAGAAAGCGTGACATCGTTAGTACAAATGGGGGGGGTTGAATCCATAGGTATGGCGCGGGATAGCCGTGATA CCTCGGTTATTCAGGCGCGAACGGAAGCTCAAGGTCATTACTTATCAGCCATAGAAAGTAAACAGCTCATCTTCGCCACC GGTGAAGCAGGGTGCGGTAAAACCTATATCAGCGCTGCAAAAGCAGCAGAAGCGTTAATTCATAAAGAAGTTGATCGAAT CATCGTCACGCGACCTGTGCTACAGGCAGATGAAGACCTGGGTTTTCTGCCCGGTGATATCTCTGAGAAATTTGCGCCTT ATTTCCGCCCGGTGTATGACATCTTACTGCGTCGCCTGGGCTCGTCATTTATGCAATATTGCTTGCGACCTGAAATCGGT AAAGTGGAGATTGCGCCTTTCGCCTATATGCGCGGGCGTACCTTTGAAAATGCGGTGGTGATCCTCGACGAGGCACAAAA TGTAACCGCCAGCCAAATGAAGATGTTTCTGACCCGCCTCGGTGAAAATGTCACGGTCATCGTTAATGGTGATATTACCC AATGCGATCTGCCTAGAGGCGTGAAATCGGGTCTCAGCGATGCACTGGAGCGTTTTACTGAGGATGAGATGATCGGCATC ATCCGTTTTGATAAACAGGACTGTGTTCGTTCGGTACTCTGTCAGCGAACATTAAATGCTTATTCATAG
Upstream 100 bases:
>100_bases TTATTGGCTGCAAAGGAAGCCAAAACCTCATCCGTATGTGAAACATAATCGTACTAGCAACGGCTGCTACGGTAGGTGAA ACAAACAGTAAGGTGCCACA
Downstream 100 bases:
>100_bases CGTATAGAGCGTATAGAGCGTATAGAGCGTATAGGTTATAAGCTAACTCGCCTGTGAATCAAGAATACACAATAAATATC CTCCGGCATAGCCGGAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphate starvation-inducible protein psiH [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGRQKAVIKARREAKRVIRRDSRSHRQREEESVTSLVQMGGVESIGMARDSRDTSVIQARTEAQGHYLSAIESKQLIFAT GEAGCGKTYISAAKAAEALIHKEVDRIIVTRPVLQADEDLGFLPGDISEKFAPYFRPVYDILLRRLGSSFMQYCLRPEIG KVEIAPFAYMRGRTFENAVVILDEAQNVTASQMKMFLTRLGENVTVIVNGDITQCDLPRGVKSGLSDALERFTEDEMIGI IRFDKQDCVRSVLCQRTLNAYS
Sequences:
>Translated_262_residues MGRQKAVIKARREAKRVIRRDSRSHRQREEESVTSLVQMGGVESIGMARDSRDTSVIQARTEAQGHYLSAIESKQLIFAT GEAGCGKTYISAAKAAEALIHKEVDRIIVTRPVLQADEDLGFLPGDISEKFAPYFRPVYDILLRRLGSSFMQYCLRPEIG KVEIAPFAYMRGRTFENAVVILDEAQNVTASQMKMFLTRLGENVTVIVNGDITQCDLPRGVKSGLSDALERFTEDEMIGI IRFDKQDCVRSVLCQRTLNAYS >Mature_261_residues GRQKAVIKARREAKRVIRRDSRSHRQREEESVTSLVQMGGVESIGMARDSRDTSVIQARTEAQGHYLSAIESKQLIFATG EAGCGKTYISAAKAAEALIHKEVDRIIVTRPVLQADEDLGFLPGDISEKFAPYFRPVYDILLRRLGSSFMQYCLRPEIGK VEIAPFAYMRGRTFENAVVILDEAQNVTASQMKMFLTRLGENVTVIVNGDITQCDLPRGVKSGLSDALERFTEDEMIGII RFDKQDCVRSVLCQRTLNAYS
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=262, Percent_Identity=91.2213740458015, Blast_Score=498, Evalue=1e-142, Organism=Escherichia coli, GI145693103, Length=232, Percent_Identity=44.8275862068966, Blast_Score=193, Evalue=7e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 29372; Mature: 29241
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQKAVIKARREAKRVIRRDSRSHRQREEESVTSLVQMGGVESIGMARDSRDTSVIQAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHH TEAQGHYLSAIESKQLIFATGEAGCGKTYISAAKAAEALIHKEVDRIIVTRPVLQADEDL HHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC GFLPGDISEKFAPYFRPVYDILLRRLGSSFMQYCLRPEIGKVEIAPFAYMRGRTFENAVV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCEEE ILDEAQNVTASQMKMFLTRLGENVTVIVNGDITQCDLPRGVKSGLSDALERFTEDEMIGI EEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE IRFDKQDCVRSVLCQRTLNAYS EEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRQKAVIKARREAKRVIRRDSRSHRQREEESVTSLVQMGGVESIGMARDSRDTSVIQAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHH TEAQGHYLSAIESKQLIFATGEAGCGKTYISAAKAAEALIHKEVDRIIVTRPVLQADEDL HHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC GFLPGDISEKFAPYFRPVYDILLRRLGSSFMQYCLRPEIGKVEIAPFAYMRGRTFENAVV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCEEE ILDEAQNVTASQMKMFLTRLGENVTVIVNGDITQCDLPRGVKSGLSDALERFTEDEMIGI EEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE IRFDKQDCVRSVLCQRTLNAYS EEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]