| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is fabH [H]
Identifier: 170024446
GI number: 170024446
Start: 2455494
End: 2456501
Strand: Reverse
Name: fabH [H]
Synonym: YPK_2217
Alternate gene names: 170024446
Gene position: 2456501-2455494 (Counterclockwise)
Preceding gene: 170024448
Following gene: 170024445
Centisome position: 52.38
GC content: 51.19
Gene sequence:
>1008_bases ATGTCGACATCATTAATTTCAGCACCTCATCTGGCGTTCAAAATTATCGCCACAGGGGTATCGTTACCCCCTGATAGGGT GGAATCCTCGACGTTGGATCGTAAACTCAATAAGCCTGTCGGTTATGTAGAACAACGTTCTGGTGTCCGGCATCGTTATC ATGCGACGGCAGATGCTAACCAAGCTGAGTTAGCGGCGGCAGCACTGCATGATGCCCTTGAGCGCCATGGGATCAATCCT TCCTCAATCGATTTATTAATATCAGCCTCGGCTATTGCCTACCAGGCCCTACCGTGTACGGCGGTGCATATTCTCAAAAT AGCGGGTCTGGCACCTCGCATTGCTGGGTTTGATATCAATAGCAGTTGCGTGAGCTTTATTTCCGCATTACAGGTGGCTG CGGGGCTACTGAATGCCGGAACTTATCAGCGTATCGCTATTGTTTCAGCCGATCTGGCATCACGAGGTATTGACTGGAAT GATGAGGAGTCTTCGCTGATCTTCGGTGATGGTGCCGCATGTGCCATTGTGGAACGAGGAGATGGCCGCAGTAGCATATT AGCCAGTCTGGTTGAAATGTATCCTACGGGCAGTGAGTTATGTGAGATTCGGGCGGGGGGCACACGATGCAACCCTCGCT CAGGTATGGATAACGACGATTTCTTATTTCATATGCAGGGCAAGAGGCTGTTCCGACAAGCCTCTGGTATCATTGAAGAT TATTTCCAGCGGCTATTGGAAAAAAGTGGGCTGACATTAGCGGATATTGCCACGGTAATTCCGCATCAGGCGAGCCATTT ATCGCTGGCGCATATGCGCAAACGCTTACATGTGCCAACAGATGTGCTGGTGGATATCTATCGAGATCATGGTAACCAGG TGGCGGCATCGATACCAACTGCATTGCATGCCGCCGTGATGAGCGGGCGCTTTTCGCCGGGTAAACCGGTGATGCTTATT GGTACCGCAGCAGGGTTGACGCTGGCGGGGATGGTTTTGCTGCCATGA
Upstream 100 bases:
>100_bases TTTTCGTTCCCCAATAATTAGGGGCAGCCAAAGGGAGATTTCTCCCCAGCCACTCACTGGCACTTCACGTTTCAAGCGCT AAAAAGGTATCTATCTTTCC
Downstream 100 bases:
>100_bases GAGCCTTACGATCATGAAAGTCTTAGTGACAGGGGCAACCAGTGGATTGGGGCGCAACGCAGCACAATGGCTGTTGGAGG CAGGGCACGAGGTTTATGCT
Product: beta-ketoacyl-acyl-carrier-protein synthase I
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSTSLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINP SSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWN DEESSLIFGDGAACAIVERGDGRSSILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPTALHAAVMSGRFSPGKPVMLI GTAAGLTLAGMVLLP
Sequences:
>Translated_335_residues MSTSLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINP SSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWN DEESSLIFGDGAACAIVERGDGRSSILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPTALHAAVMSGRFSPGKPVMLI GTAAGLTLAGMVLLP >Mature_334_residues STSLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINPS SIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWND EESSLIFGDGAACAIVERGDGRSSILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIEDY FQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPTALHAAVMSGRFSPGKPVMLIG TAAGLTLAGMVLLP
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=314, Percent_Identity=27.7070063694268, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 35635; Mature: 35504
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADAN CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCC QAELAAAALHDALERHGINPSSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDIN HHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCC SSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWNDEESSLIFGDGAACAIVERG HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCEEEECCCEEEEEECC DGRSSILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED CCHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPT HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHH ALHAAVMSGRFSPGKPVMLIGTAAGLTLAGMVLLP HHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHEECC >Mature Secondary Structure STSLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADAN CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCC QAELAAAALHDALERHGINPSSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDIN HHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCC SSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWNDEESSLIFGDGAACAIVERG HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCEEEECCCEEEEEECC DGRSSILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED CCHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPT HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHH ALHAAVMSGRFSPGKPVMLIGTAAGLTLAGMVLLP HHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA