| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024441
Identifier: 170024441
GI number: 170024441
Start: 2450132
End: 2451286
Strand: Reverse
Name: 170024441
Synonym: YPK_2212
Alternate gene names: NA
Gene position: 2451286-2450132 (Counterclockwise)
Preceding gene: 170024442
Following gene: 170024440
Centisome position: 52.27
GC content: 48.05
Gene sequence:
>1155_bases ATGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGAC GCAGGCAGGGTGTGGCGTACCACAAGCCACCGCCACGATATTGCAACCTGTGTTGAGCGGTGATCCACAATTGGCAAGCG TGCTGGAGGCAAACGTCGTTGCACTAAAACAGGCACGTTTTTTTTGGCTTATTGACGATGATGATACGGTGGCAAGAGAG ATAGCCATCAGTATTCAGTCGCGTTATCCCGACAGGGAAATTAAGGCAAGCTATTTCCCCTCAGCGCCTGAAGGGGTTAA TCCTAAAGTTTTCAAGCTCGAACAGGCCTGGCGGGAGGTGGCGAGTGACATCTTATTGGTATTGGACGACGATGCGTTTT TGTCAGCAGAGTCTTTCGGGACGCTATTGAACCAGATTGAAGAGGGCGCATTAGTGACCGCGCTTCCTTATTATTGTGCC GATAGCAATGGGTACTCCCGGCTATTGGCGCAATTCGTTAATGATAATTCCGGTTTCACCTACCTGCCCTTGTTGCCGTT TTCACCCCCCTTAACCATCAATGGGATGTGTTATGCGATATCCGTCAATACGTTGGCTCAAGTGGGGGGCTTTGCCGCTA TTCTACACGACCTGGCCGATGATCTGGCGTTGGCAACCCTGCTCAGACAACATCATATTCGTCTAATACAATCCACCGCC CCAGTAAGGGTTCAAACCAGTCTTTCTTCTGGCAAAAAGTATATACAACAAATGCATCGTTGGTTTTTGTTTGCCACGCT ACTGTTGCGTGAAAAAACAGTGCTGATAAAACTGATTATATTTCTGCTACAGGGGCTGCATCCTTTACTCATGTGGGCGA TGTTACTCACTGTTGGATGGGAGTGGGTGACGGCGGCCCACGGCATCACAGGGATTAACCTGGGCATTATTGCGGCTTGT TTGCTGATACGCCATGCTGCCCTCCGTCACGTTCAGCAGGCCATTGCCCCTGATATCCGTTCAAATCCTATTTTTTCGCT GTTATCTGAATTAATGCAACCGTTACATTTATTACATGCGTTGTGTAACCGAACGATTTACTGGCGTACGCGGCGCTATC GTGTTTTGAGTAATAAAAAGTTTAATTCACTATGA
Upstream 100 bases:
>100_bases CATTGGATGTGAGTGCGGCTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATGCCTTTATTCGC TGGTACAAGGAACAGAAATA
Downstream 100 bases:
>100_bases ATAAGATAACCTTACAGATAGCTTATATTACCGGCCGTAGCTCGCCAGAAAGCGGCAGTTTAAGCCCGGTTCAATTAGCC TTTATCAAAAAATTAGCTCA
Product: putative glycosyl transferase
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLASVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Sequences:
>Translated_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLASVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL >Mature_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLASVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=377, Percent_Identity=22.0159151193634, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25147526, Length=394, Percent_Identity=20.5583756345178, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 42964; Mature: 42964
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLASVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREV HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC >Mature Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLASVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREV HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA