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The map label for this gene is ybjS [H]

Identifier: 170024442

GI number: 170024442

Start: 2451286

End: 2452248

Strand: Reverse

Name: ybjS [H]

Synonym: YPK_2213

Alternate gene names: 170024442

Gene position: 2452248-2451286 (Counterclockwise)

Preceding gene: 170024443

Following gene: 170024441

Centisome position: 52.29

GC content: 49.43

Gene sequence:

>963_bases
ATGACGAATATATTGATAACGGGCGCATCGGGGTTTATTGGCGGGGCATTTATGCGCCGCTTTGCCTGTCATGACGGGAT
TAGACTCTGTGGTATTGGGCGGCGCTCGGTAGAGGGTTTTCCCACGTCAGTGCGTTATCAGGCGCTGGATTTAGCCCGGC
TTGCAACACTGGATTTTACGCCAGATGTGGTTATTCATGCCGCCGGACGAGCCGGGCCATGGGGAACCCGCAGTGAGTAC
TACCGTGATAACGTGGTCACTACAGAGCAGGTGATTAAATTCTGTCAGTCCAGAGGAAACCCACGGCTAATTTATCTTTC
GACTGCCGCGGTCTATTACCGTTACTGCCATCAACTGGCACTCACTGAACAGTCTGAGATCGGGCCTGAATTTGCCAATG
ATTATGCTCTCACGAAACATCAGGGTGAGGCGCTGATCGAGGCTTATCAGGGAGAGAAAACCATTTTGCGTCCTTGTGCC
GTATTTGGCCCTGGAGACCAACTGCTTTTCCCTCCCTTATTAGACGCGGCCAGTCGTCACGGGCTTCCTCTTTTAATTTC
TGAGGTGCCCGCACGCGGGGAATTAATGTATATCGATGTGCTGTGTGATTACCTGTTAAAAGCCGCCATTAAGCCGGAAC
TGCGCCCGTTCTATAATTTATCCAATGTAGAACCCATTGAAATTAATGAATTTCTTATTGATGTCTTGAGCAAGCTTGGC
CTCCCAGCACCTAAAAGAGAGGTTCGCGTAGCCACTGCAATGCTAATCGCCGGAATCATTGAAGGTACATATCGGTTATT
GCGTATTAAAAGTGAACCGTCCATCACCCGGTTTGGCGTTGGGGTTTTGGGCTATTCGAAAACATTGGATGTGAGTGCGG
CTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATGCCTTTATTCGCTGGTACAAGGAACAGAAA
TAA

Upstream 100 bases:

>100_bases
TTAGCTGGTTGGTGGTATTGCCCTGGCATGGGGAGCGGGCGTTATAGCGCAGTGGGTAAATGGGCACCAATCCACAGATG
TCGTCAGATAAAGGTGAGCG

Downstream 100 bases:

>100_bases
TGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGACG
CAGGCAGGGTGTGGCGTACC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRSEY
YRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCA
VFGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMYIDVLCDYLLKAAIKPELRPFYNLSNVEPIEINEFLIDVLSKLG
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK

Sequences:

>Translated_320_residues
MTNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRSEY
YRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCA
VFGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMYIDVLCDYLLKAAIKPELRPFYNLSNVEPIEINEFLIDVLSKLG
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK
>Mature_319_residues
TNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRSEYY
RDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAV
FGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMYIDVLCDYLLKAAIKPELRPFYNLSNVEPIEINEFLIDVLSKLGL
PAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081792, Length=337, Percent_Identity=25.2225519287834, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 35477; Mature: 35346

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFT
CCEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDVVIHAAGRAGPWGTRSEYYRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLA
CCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
LTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAASRH
HCCHHHCCCHHHCCCCEECCCCHHHHHHHCCCCHHCCHHEEECCCCCCCCCHHHHHHHCC
GLPLLISEVPARGELMYIDVLCDYLLKAAIKPELRPFYNLSNVEPIEINEFLIDVLSKLG
CCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGS
CCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHCCHHCCCCCCCCHHHHHHHCCC
PSRSLSQGLDAFIRWYKEQK
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFT
CEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDVVIHAAGRAGPWGTRSEYYRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLA
CCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
LTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAASRH
HCCHHHCCCHHHCCCCEECCCCHHHHHHHCCCCHHCCHHEEECCCCCCCCCHHHHHHHCC
GLPLLISEVPARGELMYIDVLCDYLLKAAIKPELRPFYNLSNVEPIEINEFLIDVLSKLG
CCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGS
CCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHCCHHCCCCCCCCHHHHHHHCCC
PSRSLSQGLDAFIRWYKEQK
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]